AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02480 | ATGGGTGCTTGCGGGTGGTTTAAGAGGTTATTCGGCGTTAAAAGGAAGAAGGAAAACAGACCCAATAATATAGAGATACATCAGGATTCCAAGAATTCAAACGGATCAAGAAGCCGAGATTCGTCTGTGAGAGAATCAAATTTTCGTGCTGGTAGTACGAAAGTTATTGGTCGGAGCACAGGAACAAGAGAATTTGCTGCTACTCGAATCCAAACTGCATATCGTTCTTATCGGGCAAGAAAAGCATTACGTTGCTTGAAAGGCACATCAAGATTTCGGGAGTTAGTCGAGGCTGATGCACTTACAAAACAAGCTGCTTCTGCTCTTAACAAAATACATTTTTGGAGCAAAATGCAAACAGAAATCAGAAACCGACGTCATTGGATGGTGGCGGAAGGGCGAATGAAGCAAAAGAAGTTGGAGAATCAAGTGAAATTTGAGTCAAAGCTTCATGAACTTGAGGTCGAATGGTGTGGTGGGCCCGAGACAATGGAAGAGATCGTGTCAAGGATGCAACAACGCGAGGAAGCCACAAACAAGCGTGAACGAGCAATGGCCTATGCTTTCTATCACCAATGGAGGGCGAATTCAAATCGATATTTTGGACAAGCTTATTATGATTTGAGCAAGGAGAGCTGGGGATGGAGCTGGAAGGAGCGGTGGATCGCGGTGTGCCCATGGGAGGCTCGGGTGGTTGTGCGCCACCCAAAACCAGGTAAGAAAACAAAGCATGGTGGCGGTGCGCCAAAGATAGTGGTTGCAGTGAAGCCTCATGTGAGTAATGGAAAAGGTGCAATCAAAGGTACTTCATGA | 813 | 45.76 | MGACGWFKRLFGVKRKKENRPNNIEIHQDSKNSNGSRSRDSSVRESNFRAGSTKVIGRSTGTREFAATRIQTAYRSYRARKALRCLKGTSRFRELVEADALTKQAASALNKIHFWSKMQTEIRNRRHWMVAEGRMKQKKLENQVKFESKLHELEVEWCGGPETMEEIVSRMQQREEATNKRERAMAYAFYHQWRANSNRYFGQAYYDLSKESWGWSWKERWIAVCPWEARVVVRHPKPGKKTKHGGGAPKIVVAVKPHVSNGKGAIKGTS | 270 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02480 | 270 | ProSiteProfiles | IQ motif profile. | 63 | 91 | - | - | |
| Fra11g02480 | 270 | MobiDBLite | consensus disorder prediction | 26 | 53 | - | - | |
| Fra11g02480 | 270 | MobiDBLite | consensus disorder prediction | 18 | 53 | - | - | |
| Fra11g02480 | 270 | PANTHER | IQ-DOMAIN 5-RELATED | 5 | 237 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02480 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 89430 | Fra11g02480 | Fra6g01221 | |
| 89431 | Fra11g02480 | Fra8g00990 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr11:78494734 | Fra13g01288 | Fra-Chr13:41213136 | dispersed | |
| Fra | Fra-Chr11:78494734 | Fra4g00555 | Fra-Chr4:43856576 | wgd | |
| Fra | Fra-Chr11:78494734 | Fra6g01221 | Fra-Chr6:61887619 | wgd | |
| Fra | Fra-Chr11:78494734 | Fra8g00990 | Fra-Chr8:9362004 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fra1g01375 | . | 1 | 451 | IQD Protein family | AT5G03040 | 39.806 | 3.95e-80 | 255.0 | |
| Fra1g01841 | ACH,WGDA | 215 | 794 | IQD Protein family | AT1G19870 | 35.286 | 2.23e-87 | 291.0 | |
| Fra2g01514 | WGDA | 1 | 397 | IQD Protein family | AT3G22190 | 56.683 | 7.25e-121 | 355.0 | |
| Fra3g00875 | ACH | 1 | 453 | IQD Protein family | AT5G03040 | 44.186 | 9.85e-104 | 313.0 | |
| Fra4g00555 | . | 1 | 236 | IQD Protein family | AT3G15050 | 43.58 | 3.51e-61 | 193.0 | |
| Fra4g00904 | WGDA | 1 | 443 | IQD Protein family | AT5G13460 | 43.4 | 5.94e-99 | 300.0 | |
| Fra5g00283 | ACH,WGDA | 1 | 406 | IQD Protein family | AT3G52290 | 48.292 | 3.89e-95 | 291.0 | |
| Fra5g00388 | ACH | 1 | 461 | IQD Protein family | AT5G03040 | 52.664 | 1.44e-142 | 414.0 | |
| Fra5g00609 | ACH,WGDA | 1 | 575 | IQD Protein family | AT1G74690 | 37.393 | 7.35e-74 | 243.0 | |
| Fra6g00135 | . | 51 | 352 | IQD Protein family | AT5G62070 | 45.773 | 2.51e-41 | 147.0 | |
| Fra6g01221 | ACH | 63 | 236 | IQD Protein family | AT3G15050 | 51.724 | 1.69e-61 | 191.0 | |
| Fra6g01336 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 48.537 | 8.80e-83 | 256.0 | |
| Fra7g01012 | . | 1 | 307 | IQD Protein family | AT4G14750 | 33.742 | 2.89e-38 | 139.0 | |
| Fra7g01072 | . | 11 | 534 | IQD Protein family | AT4G00820 | 53.559 | 2.17e-152 | 444.0 | |
| Fra7g01662 | ACH | 1 | 573 | IQD Protein family | AT1G74690 | 37.691 | 6.17e-80 | 260.0 | |
| Fra7g02046 | . | 36 | 100 | IQD Protein family | AT3G51380 | 78.462 | 5.25e-28 | 98.2 | |
| Fra7g02238 | ACH | 1 | 572 | IQD Protein family | AT1G18840 | 36.788 | 2.39e-68 | 228.0 | |
| Fra7g03052 | . | 1 | 572 | IQD Protein family | AT1G18840 | 31.104 | 8.45e-56 | 192.0 | |
| Fra7g03421 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 51.716 | 5.48e-98 | 296.0 | |
| Fra7g03485 | . | 1 | 414 | IQD Protein family | AT1G72670 | 42.177 | 1.58e-83 | 259.0 | |
| Fra8g00244 | WGDA | 1 | 388 | IQD Protein family | AT3G22190 | 54.95 | 1.04e-116 | 344.0 | |
| Fra8g00399 | ACH | 1 | 480 | IQD Protein family | AT4G23060 | 41.141 | 8.20e-62 | 206.0 | |
| Fra8g00990 | ACH | 50 | 225 | IQD Protein family | AT3G15050 | 48.864 | 2.38e-50 | 164.0 | |
| Fra8g02185 | . | 1 | 371 | IQD Protein family | AT4G14750 | 46.04 | 2.49e-74 | 233.0 | |
| Fra9g00844 | . | 11 | 534 | IQD Protein family | AT4G00820 | 43.113 | 1.63e-110 | 337.0 | |
| Fra10g01051 | . | 1 | 157 | IQD Protein family | AT5G13460 | 30.769 | 1.59e-16 | 78.2 | |
| Fra10g01146 | . | 1 | 353 | IQD Protein family | AT3G16490 | 45.676 | 8.22e-56 | 186.0 | |
| Fra10g01669 | . | 11 | 534 | IQD Protein family | AT4G00820 | 43.646 | 5.59e-113 | 342.0 | |
| Fra11g01641 | ACH | 1 | 374 | IQD Protein family | AT4G14750 | 48.039 | 1.51e-91 | 278.0 | |
| Fra11g02480 | ACH | 1 | 230 | IQD Protein family | AT3G15050 | 52.016 | 5.46e-78 | 235.0 | |
| Fra11g02599 | . | 1 | 392 | IQD Protein family | AT5G35670 | 43.489 | 1.04e-77 | 244.0 | |
| Fra12g00206 | . | 7 | 346 | IQD Protein family | AT5G07240 | 45.531 | 7.98e-48 | 164.0 | |
| Fra12g00500 | ACH,WGDA | 1 | 445 | IQD Protein family | AT5G03040 | 46.186 | 3.14e-110 | 331.0 | |
| Fra12g01020 | ACH,WGDA | 1 | 575 | IQD Protein family | AT1G74690 | 37.627 | 1.20e-83 | 270.0 | |
| Fra12g01955 | . | 200 | 788 | IQD Protein family | AT1G19870 | 34.451 | 8.54e-78 | 263.0 | |
| Fra13g00479 | WGDA | 1 | 443 | IQD Protein family | AT5G13460 | 42.794 | 6.54e-93 | 285.0 | |
| Fra13g00954 | ACH | 1 | 456 | IQD Protein family | AT5G03040 | 47.277 | 8.45e-119 | 350.0 | |
| Fra13g01288 | . | 1 | 263 | IQD Protein family | AT2G33990 | 47.015 | 2.18e-65 | 202.0 | |
| Fra14g00047 | . | 53 | 352 | IQD Protein family | AT5G62070 | 45.322 | 1.00e-39 | 143.0 | |
| Fra14g00847 | . | 1 | 332 | IQD Protein family | AT3G16490 | 41.21 | 3.35e-39 | 141.0 | |
| Fra14g01360 | WGDA | 178 | 260 | IQD Protein family | AT1G19870 | 48.193 | 7.68e-14 | 73.2 | |
| Fra14g01516 | ACH | 1 | 451 | IQD Protein family | AT5G03040 | 39.535 | 1.66e-82 | 261.0 | |
| Fra15g01235 | ACH | 1 | 271 | IQD Protein family | AT3G52290 | 40.604 | 2.90e-53 | 178.0 | |
| Fra16g01433 | ACH | 1 | 458 | IQD Protein family | AT5G03040 | 44.231 | 1.31e-105 | 318.0 | |
| Fra16g01800 | ACH | 163 | 484 | IQD Protein family | AT4G23060 | 40.395 | 1.65e-57 | 194.0 | |
| Fra16g01965 | . | 1 | 413 | IQD Protein family | AT2G26180 | 59.865 | 5.08e-143 | 413.0 | |
| Fra18g00027 | . | 1 | 469 | IQD Protein family | AT3G49260 | 45.783 | 2.73e-95 | 293.0 | |
| Fra18g00318 | ACH | 1 | 517 | IQD Protein family | AT3G59690 | 48.474 | 9.87e-147 | 429.0 | |
| Fra18g00424 | . | 1 | 517 | IQD Protein family | AT3G59690 | 48.474 | 7.44e-147 | 429.0 | |
| Fra10000242.1g00003 | . | 397 | 516 | IQD Protein family | AT3G59690 | 49.194 | 1.86e-26 | 100.0 | |
| Fra10000339.1g00050 | . | 450 | 480 | IQD Protein family | AT4G23060 | 67.742 | 1.45e-08 | 48.9 |