Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02484 | ATGGCGACTCGCGTTCTCCTTCGCACTCTTCTTTCCTCCGTCAATCAAACCCTAATCCCCCGTTCATTCACCAATTCATCTTATCTCCTCCGTCTCCGCCCCATCATCGCCGTCGCCGCCGCGAATCTCCGCCAGTCCTCCGTCTCACCGGCGAATCTCCGTGCTTTCTCCACACGACCGACTACTTCTTCACTAAACGATTCGAACCCTAACTGGTCTAATCGTCCCCCAAAGGAGACGATTCTTCTCGACGGTTGCGATTTCGAACACTGGCTTGTGGTGATGGAGAAACCCGAAGGTGAGCCCACCAGAGATGAGATAATTGAATCGTATATCAATACCCTAGCTAAGGTTGTCGGCAGTTATGATGAAGCGAGGATGAAGATTTACTCTGTTTCGACAAGATGTTATTATGCCTTTGGAGCTTTAGTGTCTGAAGAGCTTTCTTACAAGCTTAAGGAATTACCTGGAGTTCGTTGGGTGCTGCCTGATTCTTACTTGGATGTTAAGAACAAGGATTACGGAGGTGAACCTTTTATTGATGGGAAGGCTGTTCCTTATGATCCAAAGTACCATGAGGAATGGATCAGAAACAATGCTCGCGCCAATGAGAGAAACAGGAGGAATGACAGGCCTCGCAACTTTGATCGTTCAAGAAACTTTGAAAGAAGAAGAGAGAACATGCAAAGCAACCGTGGACCTCCCAACATGAGCGGGCCACCGCCCAACAACATGGGTGGTCCACCACCCAACATGAGCGGTCCACCGCCCAATAACATGGGCGGTCCACCACCCAACATGGGAGGCCCACCGAACATGGCTGGTGGTCCACCAAACATGGGAGGAAGGCCCAATAACTGGAATGGGCCCCCACCACCCTACAGCGGAGGGCCGCCAAACATGGGAGGACCGAGGCCTAATACGGCTCCTAACTACCAGCAGCAGGGGCGGTATGGACCAAATAATGGAAACATGCCATATCAATCTGGGCCCGGTCCCAACAGTTATCCTCCAAATGCAGGCAGTGGAAACCCGTATCAGCCTCAGGATGTACCTGGAAGAGACATGCCCCCTTCAGCCAACTATGAGTAA | 1092 | 51.37 | MATRVLLRTLLSSVNQTLIPRSFTNSSYLLRLRPIIAVAAANLRQSSVSPANLRAFSTRPTTSSLNDSNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGEPTRDEIIESYINTLAKVVGSYDEARMKIYSVSTRCYYAFGALVSEELSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENMQSNRGPPNMSGPPPNNMGGPPPNMSGPPPNNMGGPPPNMGGPPNMAGGPPNMGGRPNNWNGPPPPYSGGPPNMGGPRPNTAPNYQQQGRYGPNNGNMPYQSGPGPNSYPPNAGSGNPYQPQDVPGRDMPPSANYE | 363 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02484 | 363 | MobiDBLite | consensus disorder prediction | 284 | 305 | - | - | |
| Fra11g02484 | 363 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 16 | 229 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) | |
| Fra11g02484 | 363 | MobiDBLite | consensus disorder prediction | 306 | 346 | - | - | |
| Fra11g02484 | 363 | MobiDBLite | consensus disorder prediction | 203 | 229 | - | - | |
| Fra11g02484 | 363 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 88 | 179 | IPR054059 | - | |
| Fra11g02484 | 363 | MobiDBLite | consensus disorder prediction | 235 | 272 | - | - | |
| Fra11g02484 | 363 | MobiDBLite | consensus disorder prediction | 203 | 363 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02484 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 89434 | Fra11g02484 | Fra6g01217 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr11:78515189 | Fra4g00461 | Fra-Chr4:41054362 | dispersed | |
| Fra | Fra-Chr15:582899 | Fra11g02484 | Fra-Chr11:78515189 | transposed | |
| Fra | Fra-Chr2:65180134 | Fra11g02484 | Fra-Chr11:78515189 | transposed | |
| Fra | Fra-Chr11:78515189 | Fra6g01217 | Fra-Chr6:61813025 | wgd |