Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02496 | ATGGCTCCTTTATCTTCTTCCTTTTCATTCATCTTCTTCTGCTTCATCTTCCGATCATTCTCCGTCTCCGACGCCGTTGTTCCGGCCAACGAAACCTTTCGCTACGTCAACGAAGGCGACTTCGGAATCTACGACTCCGAATACGCACCGACATACCACCCCCTTCCGCCATTCACCACCCCCTTCCAACTCTGTTTCTACAACACCACCCCAAACGCGTACACACTCGCCCTCCGCATGGGGACGAGGCGCGACGGCACCGTCATGCCATGGGTCTGGGAAGCCAATCGAGGCAAACCGGTCCGCGAAAGCGCAACGTTCTCCTTAGGCTCGGACGGAAACCTCGTCCTCGCGGAAGCAGACGGTCAGATAGTATGGCAAACCAACACCGCCAATAAAGGTGTTGTCGGTTTCGCCATACTATCTAACGGAAACATCGTGCTCCGTGACTCAATAGGTAGCTTTGTCTGGCAAAGCTTTGACTCCCCCACTGACACTCTTTTGGTGGGCCAGACTCTCAAAGTAAAAGGTGGGCCCACCAAACTGATCAGCAGGGAGTCGATCAGTAACAACAATAACGGAGCTTATAGCTTCGTTATTGAGCCTAAAAGATTGGCTTTGTATTACAAGAATAATATGCGTTACTGGTCAACTACTTTCGCCGATCTATACACACAAAATTTGAATATTGTAAATGCAACGTTAGATATTGCGGAAACTGAATATGAAGAAAACAATTTTCACACACTAAGGTGTGGACTTGATAAACCAAGTGTTACCGTATACCCTTCTTTAGATTTGGGTACAGTTCGGTACAATAGCTCGTTATCGTATCTTCGATTGGGGATCGACGGGAACCTAAGGCTATTCACCTACCGCGCGAATGTGCGGGGGAACGCGTGA | 903 | 48.95 | MAPLSSSFSFIFFCFIFRSFSVSDAVVPANETFRYVNEGDFGIYDSEYAPTYHPLPPFTTPFQLCFYNTTPNAYTLALRMGTRRDGTVMPWVWEANRGKPVRESATFSLGSDGNLVLAEADGQIVWQTNTANKGVVGFAILSNGNIVLRDSIGSFVWQSFDSPTDTLLVGQTLKVKGGPTKLISRESISNNNNGAYSFVIEPKRLALYYKNNMRYWSTTFADLYTQNLNIVNATLDIAETEYEENNFHTLRCGLDKPSVTVYPSLDLGTVRYNSSLSYLRLGIDGNLRLFTYRANVRGNA | 300 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02496 | 300 | CDD | B-lectin | 46 | 163 | IPR001480 | - | |
| Fra11g02496 | 300 | Pfam | D-mannose binding lectin | 92 | 176 | IPR001480 | - | |
| Fra11g02496 | 300 | Gene3D | - | 58 | 161 | IPR036426 | - | |
| Fra11g02496 | 300 | SMART | blect-4 | 46 | 163 | IPR001480 | - | |
| Fra11g02496 | 300 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 62 | 292 | IPR051343 | - | |
| Fra11g02496 | 300 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 71 | 218 | IPR036426 | - | |
| Fra11g02496 | 300 | ProSiteProfiles | Bulb-type lectin domain profile. | 40 | 161 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02496 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr11:78632809 | Fra11g02521 | Fra-Chr11:78836653 | dispersed | |
| Fra | Fra-Chr11:78615778 | Fra11g02496 | Fra-Chr11:78632809 | tandem |