AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02531 | ATGAGAGTGCATGTAGATTGCCCTGGATGCGAGAACAAGATCAGAAAAGCTCTTCAAAGACTCAAAGGAGTGGAGAACGTAGACATAGACATGGCGTTACAAAAGGTGACGGTCACTGGAATCGCCGACGAGAAGAAGGTGTTGAAGACGGTGAGAAAAACCGGTCGACGAGCCGAGATATGGAACATACCCTACAACCCCGATATCCGTACCCATAACTACAATGTTAATCAGTATGCTCAACAACAGCAACTGCAGCAACAACAAAATGGTGGTTCGGGCCCAGGCCCAACTGCGACATTCTACACCCGACAACCGTCTTCTGCATCATCGTATAACTACTACAAACACGGTTATGATGACCAGTATGTTTATAACCCGGTCCAGTCCTCGGGCTTGATTGGACACCAGACGGGTGCTGCCTTTAGCGATGAGAACACTCATGCTGCATGTAATATTATGTAG | 465 | 47.53 | MRVHVDCPGCENKIRKALQRLKGVENVDIDMALQKVTVTGIADEKKVLKTVRKTGRRAEIWNIPYNPDIRTHNYNVNQYAQQQQLQQQQNGGSGPGPTATFYTRQPSSASSYNYYKHGYDDQYVYNPVQSSGLIGHQTGAAFSDENTHAACNIM | 154 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02531 | 154 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 59 | IPR006121 | GO:0046872(InterPro) | |
| Fra11g02531 | 154 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 62 | IPR036163 | GO:0046872(InterPro) | |
| Fra11g02531 | 154 | Pfam | Heavy-metal-associated domain | 3 | 56 | IPR006121 | GO:0046872(InterPro) | |
| Fra11g02531 | 154 | Gene3D | - | 1 | 60 | - | - | |
| Fra11g02531 | 154 | CDD | HMA | 1 | 59 | IPR006121 | GO:0046872(InterPro) | |
| Fra11g02531 | 154 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 1 | 154 | IPR045181 | GO:0046872(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02531 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr11:78931079 | Fra9g00850 | Fra-Chr9:7684997 | dispersed | |
| Fra | Fra-Chr11:78931079 | Fra4g00590 | Fra-Chr4:44334787 | transposed |