Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02559 | ATGAGTGGGGGTAGGGTTTCCATTCCCAACAATGTGAGGAAGACGATCCAGAACATCAAGGAGATCACGGGTAATCACAGTGAAGATGAGATATATGCAATGCTTAAAGATTGTTCTATGGATCCGAACGAGACCGCTCAGAAGCTCCTCTTGCAGGATCCATTTCATGAAGTTAAGAGGAAGCGTGACCGCAAGAAAGAGAATGTGAATAAAGAACCTACGGAGTCCAGATGGAAACCTGGGATGCAGGGAAGGGGGAACAGGGGTGGCAGGTCGAACTACTCGTCTCGTCGCATTTCTAATGATGTAGGTGGTGGCAAGCCATTACTTTCTGTAAAGGAAAATGGAATGAGTAAAGGTGCAGATGATGGTCCAAATCAGTCAATGCCTCAGGGTCAGAAGAATAAAGAGACATTTATGGTTAAAAGCCCTTCCCATGATGTACCTGATGGAATTGCACATTCCTCTGTGGGAAGTGATGAGAAGAAATCTGTAGCGGTTCCTGCTGTTGAGGCAAGTAAGGAACCCACTGTTGGTGATAGTCATGGAACCCTCATCTCGAGTGTCAATGAAACATCAGCTTCTACTTCTAAGATACCATCACCTTCACCAGGGTTACAATTGTCTGATAAAGATCCTATTCTGAAGCCTTCACAAGATTCACGGCTCCTTGTGGGTACAATCAGACGTGAAGTTGGGAGTCAACAAACTCTTGTTGACCAAATACACAAGACTCCCCATGAGACTGAATCAACTGCATCAGGTTCTGAGGTTGGAAACTCCTCCGTGCAAGGGAAGGCACAATCTTCTCATGTCCCACTTTCAATTTCCAGGCCTTCTTCAAACTATAATAATAGGCAGCAACAAGCAATTGGGCCTCAAAAAGGTCCGAGTATGGAATGGAAACCAAAACCAACAAATCCAGTTCTTGCTCAAGGGACCGGGGCAACTGAGCCAGTTAAGGTGCATGTGGTTCAAGTTGAAAGTCAAACTCCAAACCCGTTTGCAGCCCGTAATCTTGATTTAAAGGGCACGACCCATGAGCTGGAGAAGAAGCTAGAGGAATCACACATATCAGATGACCAACATGTTATTATTCCAAATCACCTCCATGTTCCTGAAGCTGAAAAACTCGGGTTCTATTTTGGGAGTTTTGATGCCAGCTTTAGTCTTAACATGACCTCCTCGAACATGTCTGGGTCTGGGCTCAGGGCTGAGCACGTTAGTGACAAGAGTTCCGAGGCTTCCGAGGTGGTTGATGAAAGTATAGACGAGCAGCCCAGAGATCAAAATAATGCGTCGGCAAGTGCCGATGATGAAGACCATCTTGATCATCCATCATCATCTGATAACATGCCCGAGAATCTATCAGCCGAAGGTGACTTGTCATCAAATTCAGGCTTCAATCACCAAGAATCCAAACAAGAGACTTCACTTCCAACAGCAAGCCATCAACACCCAATTCTTCACACGTCTCCTAACTTAAGTTTTGGCTTCATTCCTCCAATGATTGGGACCCACCCAGCATCTTTTGAGACCAACGAGTCTCATAGTCATGATGGTTCGCAAGTCCCAAATGTTGTATCTCAGCAACCATTTGACCCAGCAAGCTATTATGCTCAATTTTATCGTCCTGGTGCTGACGTGGATGGCCGCATGTCACCCTTTCATACAACCGGGGTTCCAACCAAGTTTAATGGAAATATTCCTGTGTTATCTCCTCAGGCTTCTCATTCTTCTCAAGAGGTTGGGAACTCATTGATGTTATCTGGTGCTGGTCCAACACCAATAGCCACTACACAAACTGGCGGATTTATGCAAACCTCCATAGCCATGACTCAGCAACCATTACCCATTTTCAGGCAACCAACTGGAGTTCATTTACCACATTACCCTCCAAATTATATCCCATACGGGCCATATTTCCCACCATTTTATGTTCCTCCACAAGCTATCCATCAATTTTTGAGTAATAATACATTCCCACAACCTCCTCAAGCTGGTAGTATGTACCCGCCCCCACCAGTGGCTAGCTCTAAATACCCACTTCCACAATACAAAACGGGAGGTAATACAGGGAACCCGGTTAATATTGGAATGCCTGGAAGCTATGGACCGTATGGCTTTAACGCAGCTGGCTATAACTCTGGTTCAGCAGCTACTGCTGGCAATTCAACTTCTGATGAAGACCTAGGTGGGTCCCAGTTTAAGGAAAGTAATGTCTACATTACTGGACAGCAGAGTGAAAATTCAGGTGTATGGATGGCTGCACCGGGTCGAGACATATCTGGTATGCAGGCTAATTCTTTCTATAACATTCCTCAAGGTGGTCAAGTTGCATATACGCCAACACAAGCCAGCCATGGATCTTTCGCCAGTCTTTATCACCACCCGGCCCAACCAGTAACCACCAGTGCGGTTCACCCACTTCTCCAACAGTCCCATGGACCCGGCGTTGACATGGCAGGACCCACACCTCAAATCAACTGGCCTAATAACTACTGA | 2505 | 45.95 | MSGGRVSIPNNVRKTIQNIKEITGNHSEDEIYAMLKDCSMDPNETAQKLLLQDPFHEVKRKRDRKKENVNKEPTESRWKPGMQGRGNRGGRSNYSSRRISNDVGGGKPLLSVKENGMSKGADDGPNQSMPQGQKNKETFMVKSPSHDVPDGIAHSSVGSDEKKSVAVPAVEASKEPTVGDSHGTLISSVNETSASTSKIPSPSPGLQLSDKDPILKPSQDSRLLVGTIRREVGSQQTLVDQIHKTPHETESTASGSEVGNSSVQGKAQSSHVPLSISRPSSNYNNRQQQAIGPQKGPSMEWKPKPTNPVLAQGTGATEPVKVHVVQVESQTPNPFAARNLDLKGTTHELEKKLEESHISDDQHVIIPNHLHVPEAEKLGFYFGSFDASFSLNMTSSNMSGSGLRAEHVSDKSSEASEVVDESIDEQPRDQNNASASADDEDHLDHPSSSDNMPENLSAEGDLSSNSGFNHQESKQETSLPTASHQHPILHTSPNLSFGFIPPMIGTHPASFETNESHSHDGSQVPNVVSQQPFDPASYYAQFYRPGADVDGRMSPFHTTGVPTKFNGNIPVLSPQASHSSQEVGNSLMLSGAGPTPIATTQTGGFMQTSIAMTQQPLPIFRQPTGVHLPHYPPNYIPYGPYFPPFYVPPQAIHQFLSNNTFPQPPQAGSMYPPPPVASSKYPLPQYKTGGNTGNPVNIGMPGSYGPYGFNAAGYNSGSAATAGNSTSDEDLGGSQFKESNVYITGQQSENSGVWMAAPGRDISGMQANSFYNIPQGGQVAYTPTQASHGSFASLYHHPAQPVTTSAVHPLLQQSHGPGVDMAGPTPQINWPNNY | 834 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02559 | 834 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 834 | IPR044277 | GO:0051082(PANTHER) | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 407 | 427 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 235 | 309 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 49 | 222 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
| Fra11g02559 | 834 | Pfam | GBF-interacting protein 1 N-terminal | 8 | 67 | IPR009719 | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 235 | 294 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 121 | 139 | - | - | |
| Fra11g02559 | 834 | SUPERFAMILY | UBA-like | 8 | 70 | IPR009060 | GO:0005515(InterPro) | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 180 | 204 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 397 | 494 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 506 | 530 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 509 | 530 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 434 | 448 | - | - | |
| Fra11g02559 | 834 | MobiDBLite | consensus disorder prediction | 449 | 492 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02559 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 89461 | Fra11g02559 | Fra8g01033 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr11:79253861 | Fra7g03495 | Fra-Chr7:92173702 | dispersed | |
| Fra | Fra-Chr11:75701979 | Fra11g02559 | Fra-Chr11:79253861 | transposed | |
| Fra | Fra-Chr11:79253861 | Fra8g01033 | Fra-Chr8:9962931 | wgd |