Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fra11g02563	ATGGAAGCTTTGATGCATGTGGGATTTAGGGTTTATTCCGATTCCATAAACCCTAGCTCCAGATTCAATCATCGGAAGTCGCCATCAATCCTAATGGAAAACCGCAGAACCAATCTTACTTGCATTCGAGCTCAACAGTCTGGTACGAAGGATGGGCCTTTAATTGCTACTCCAACCAGTGATTCAGTAGTTGAGGAATTGAAAAGTAAAGATTGGGAAATTGGGGTTCTAAAAGATGAAATAGCTGCAACTCAGGGTATTCGGATACGAAGACGACCACCAACAGGGCCTCCTTTGCATTATGTTGGTCCTTTTGAGTTCAGGTTACAGAATGAAGGGAATACTCCTCGTAATATACTCGAGGAGATTGTGTGGAACAAAGACACAGAGGTTGCCCAGATGAAAGAGAGAAAACCAATATTTTCACTAAAAAAGGCTCTTGAAAACGCTCCTCCTCCAAGAGACTTTCTAGGAGCTCTCAAGGCATCATATTTACGAACAGGATTGCCTGCTTTAATTGCTGAAGTGAAAAAGGCTTCACCAAGTAGAGGTGTTCTAAGGGAAGATTTTAATCCTGTTGAAGTCGCGCAAGCTTATGAGAAAGGTGGAGCAGCATGCCTTAGTGTTTTGACTGATGCAAAATATTTTCAGGGAAGCTTTGAGAATCTAGAGGCTATACGTAATGCTGGAGTCAAGTGCCCTCTATTGTGCAAAGAGTTTATTGTGGATGCATGGCAGCTGTATTATGCAAGAACAAAGGGTGCAGATGGTGTTTTGTTAATTGCAGCTGTTTTACCAGATATTGATATTAAATATATGCTTAAGATTTGCAAAATGATTGGACTGACTGCACTTGTTGAGGTTCATGATGAGAACGAAATGGATCGGATGCTGGCAATTGATGGAATTGAACTCATTGGCATCAATAATCGAAATCTTGAAACATTTGAAGTCGACATTAGCAACACAAAGAAGTTGCTTGAAGGAAAACGCGGGGAAATGATCCGGCAGAAGGACATATTAGTGGTCGGGGAGTCTGGACTGTTCACTCCTGCTGATGTTGCCTATGTACAAGAAGCTGGTGTGAAAGCTATACTGGTCGGGGAGTCGATTGTGAAGCAGAAAGATCCAACAGAAGGAATTAGAGAACTTTTTGGTAAAGATATAATGGGTTAA	1176	41.58	MEALMHVGFRVYSDSINPSSRFNHRKSPSILMENRRTNLTCIRAQQSGTKDGPLIATPTSDSVVEELKSKDWEIGVLKDEIAATQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDTEVAQMKERKPIFSLKKALENAPPPRDFLGALKASYLRTGLPALIAEVKKASPSRGVLREDFNPVEVAQAYEKGGAACLSVLTDAKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYARTKGADGVLLIAAVLPDIDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIELIGINNRNLETFEVDISNTKKLLEGKRGEMIRQKDILVVGESGLFTPADVAYVQEAGVKAILVGESIVKQKDPTEGIRELFGKDIMG	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fra11g02563	391	Hamap	Indole-3-glycerol phosphate synthase [trpC].	118	386	IPR013798	GO:0004425(InterPro)
	Fra11g02563	391	CDD	IGPS	156	384	IPR013798	GO:0004425(InterPro)
	Fra11g02563	391	Pfam	Indole-3-glycerol phosphate synthase	120	384	IPR013798	GO:0004425(InterPro)
	Fra11g02563	391	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	58	387	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)
	Fra11g02563	391	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	172	190	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Fra11g02563	391	Gene3D	Aldolase class I	112	389	IPR013785	-
	Fra11g02563	391	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	112	390	-	-
	Fra11g02563	391	SUPERFAMILY	Ribulose-phoshate binding barrel	127	386	IPR011060	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fra11g02563	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	89464	Fra11g02563	Fra6g01139

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fra	Fra-Chr11:79280203	Fra6g01139	Fra-Chr6:60916158	wgd