AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02564 ATGTTAACCTCCGGCAGCATCAACTACAACCTCGAGTACAGGTCGACGAAAGACGACGGTTGGTACACCTGCGCCGTCCTTCTAGAACCCCAAAATCGCCTCCGCGTGAAGTTCAAGGACTTCGTTGACAGCGACTACGACGAGCTTTTCTCCGTCTCCGATTTCTCCACCAACGATGCAATCGGAGAGTTCCTCCGCCGGTTCCGACCGGAATCTGAACCGGTCGAGGATAACGAGTGCTCGAGAGTCACCGAAGGGTTCATGGTGTGTGCGACGTATACAGGCGATAGACAACTGCGGTACTTTGACGCCGTTGTTGATGCTGTGCGTTACAAAGAACACACGCCGGAGAAGTGTTTGTGCACCTATTTACTGTTCTGGCAGCATGGTCCGGAAGAGGGCAATACAACAGCCGCAAATCTTGATGATATATACCTCATTAAGTCTGGTTCTGTTGATCCAACAGTGGAAAAATTCACAGAACTTGTGAAAGAAATACTCAAACGGTCCTCTTTTGAATTTTTTCTGATCCCCAAGTATCCACTCTTGTCCCGTAAAACAAGCTCAAATGAAACTATCAGTAGATCACAGGATTTTGGCAGCACTGGACACAGTTCTCACACTGGATTCTCTGCAGGGAGGGAAAGATTCTGCCCTGAATTGAGTGATCAGGACATAGATTTGGGAGGTGGGAAACATACTGACAGACATCATTATATCATATTGGAAAACTTGGAGAAAGATTTATGTCCATTGTTAATGATGGAATTCATACATGAACAGACTTTAATCACAGCACAAGCATACGTCTTTCCAACTTCGTTAGCCGAAACATATGCAAGGGGAGCAATCTTGGTGGATAGCAAAACAAAGTTGAAAAGGATATATGAATTTATAAACAATCCGAATCACTTTATTGTATCCTCATCTGGAAGGCCATGGGTAATAGCTGAAGATAAGCTTAGAAGTGGAACATTCAACACGAACCTGCGCAGCTTGCAGCCTAAGTATGAGTCCCAGAACCGCTGTACAAAGAACGAATTGAAGGTTGTTCGATTAGGAGCAGAAGAATACACAAAAGCTAAAAAGTTAAAAGATTTGTTTTTGGAATTTCGCAATCATCTTAACGGGCTTTTGCAGAGGTTAGCTATGGAGGAGGAGAAGAAGAACCCTGGCCCATTCAGTGCAAACTAG 1194 44.56 MLTSGSINYNLEYRSTKDDGWYTCAVLLEPQNRLRVKFKDFVDSDYDELFSVSDFSTNDAIGEFLRRFRPESEPVEDNECSRVTEGFMVCATYTGDRQLRYFDAVVDAVRYKEHTPEKCLCTYLLFWQHGPEEGNTTAANLDDIYLIKSGSVDPTVEKFTELVKEILKRSSFEFFLIPKYPLLSRKTSSNETISRSQDFGSTGHSSHTGFSAGRERFCPELSDQDIDLGGGKHTDRHHYIILENLEKDLCPLLMMEFIHEQTLITAQAYVFPTSLAETYARGAILVDSKTKLKRIYEFINNPNHFIVSSSGRPWVIAEDKLRSGTFNTNLRSLQPKYESQNRCTKNELKVVRLGAEEYTKAKKLKDLFLEFRNHLNGLLQRLAMEEEKKNPGPFSAN 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02564 397 Pfam SAWADEE domain 9 144 IPR032001 GO:0003682(InterPro)
Fra11g02564 397 Gene3D - 75 142 - -
Fra11g02564 397 PANTHER SAWADEE PROTEIN 8 388 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02564 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr10:4713781 Fra11g02564 Fra-Chr11:79285599 wgd