AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02567 ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATGTGGAATTGGTGAATCAAGGGAGAACAGCAGATAATCTCGGCTTCTCAAGATCGGTTTCTAATCAGAAGCTAGATAGGCGTGAATGTGCCTCGAATTCGCCTAAATTTGAGAGATGTCGCAGGTTTCATGTTCAGATGCAGCAGACGGAATCACCCATGACATTTGGCACCAATGGTCGACCCGCGAAGGTTTATACAAATGGTCAGCCTGTGAAGTTGGGTGCCAATGGTAAACCAGTGAATTTGGCTACCAATGGTCAGCCCGTGAAGTTGGGAAGCAAAGGTCAACCAATCACCATGGTTCCCATCAGTGAGGCGGTGAATATTAAACATACGTCGAAAAAAGGATCAGGAACAGTGAATGGATCGATACAAGTTGTTAATGGAACAAGTCTTGTCAAGAGAGAAATCACACCACCACTAGTTAAGTCTGTTAAAGTTAAAGAACCTACGGGATTCCAACCTGAAGAATATAGGGTCTTGCCATCGGATGAAAGTTTCAAATGGGCAAATGAAAATTATAACTCAGTACATAGATCAATAGATGTGTGGTCTTTTGTTTTGTTTTTTCGTGTTCGTGTTCTACTTGACAATGCAAAGTGGGCATATCTTGGTTCCTTCACAGAAGAAAAACAGAAAAAGAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAACGTGTGCTTCAACTTGGTCCAACTTTTATAAAACTTGGCCAATTAGTCTCATCAAGATCAGATTTATTTCCACATGAATTAGTTGATGAACTCACCAAGTTACAGGACAGAGTACCAGCCTTCTCATCAGCAAAAGCAAAAGGTTATATTGAGAAAGAACTAGGAGCTCCGATTGAAGTACTCTTCAGGGAATTTGAAGAACAACCTATTGCAGCTGCTAGTCTTGGTCAGGTGCATCGTGCAATATTACATAATGGAGAGAAAGTAATCGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATTGATTTAAGAAATTTAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCTACAAAGGATTGGATTGGTATCTATAATGAATGTGAAAAGATCTTATACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAAATCAACAATTTAGATGGGATAGAACAAAGGGGTTATAGTCGATCCCGCATCTCTTCACGTGCCATTGAATCATACTTGATTCAGATACTGAAAACAGGTTTCTTTCATGCCGATCCTCATCCTGGAAATCTTGCTATTGATGTGGATGAATCATTAATCTACTATGATTTTGGTATGATGGGGGAGATTAAGTCACTCACCAGAGAAAGATTGATGGATCTTTTTTATGCAATTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGATAACCCTTGGAGCACTTCAACCTACTGGAGACATGTCATCAGTGAGAAGATCTATTCAGTTCTTTTTGGATAATTCACTAAATCAGTCAGCTGATCAAGAGCAAACCTTGGCTGCAATAGGAGAGGACTTATTTTCTATAGCAACAGATCAACCTTTTCGGTTTCCTTCCACCTTCGCCTTTTTAATAAGGGCATTTTCCACTCTTGAAGGAGTTGGCTACTCACTGGATCCAAAATTTTCATTTATGAAGATTGCCGCACCTTACGCACAGGAGCTGTTAGACCTCAAACAACAGCAGCCCAGTGGAACACAAATAGTTGCTGAAATGCAAAAACAAGCTGATGATGCAAGATCAAACACCATGTCAATGCCTTACAGAGTTCAAAGGATAGAAGAGTTTGTTAAACAACTAGAAGTAGGAGACCTTAAACTTCGTGTTAGAGTTCTCGAGTCCGAGAGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCCTGCACACAGTTATAGCAGGTACTCTCGTAAATATCGGCGTCACAGTTAGCACACAAGGCAGCCAACTTATAGCAAGGAGTTCATTTGTTGCTGCAGGTATTTTCATAATACTGCTCATAAGGTCCATGCAAAGGGTGAAGAATCTTGACAAAATTGAAAAGATGATTTAA 2226 39.94 MAAILASNSCYCRDVELVNQGRTADNLGFSRSVSNQKLDRRECASNSPKFERCRRFHVQMQQTESPMTFGTNGRPAKVYTNGQPVKLGANGKPVNLATNGQPVKLGSKGQPITMVPISEAVNIKHTSKKGSGTVNGSIQVVNGTSLVKREITPPLVKSVKVKEPTGFQPEEYRVLPSDESFKWANENYNSVHRSIDVWSFVLFFRVRVLLDNAKWAYLGSFTEEKQKKRRRKTASWLRERVLQLGPTFIKLGQLVSSRSDLFPHELVDELTKLQDRVPAFSSAKAKGYIEKELGAPIEVLFREFEEQPIAAASLGQVHRAILHNGEKVIVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTKDWIGIYNECEKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDGIEQRGYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSLTRERLMDLFYAIYEKDAKKVMNSLITLGALQPTGDMSSVRRSIQFFLDNSLNQSADQEQTLAAIGEDLFSIATDQPFRFPSTFAFLIRAFSTLEGVGYSLDPKFSFMKIAAPYAQELLDLKQQQPSGTQIVAEMQKQADDARSNTMSMPYRVQRIEEFVKQLEVGDLKLRVRVLESERAARKATILQMATLHTVIAGTLVNIGVTVSTQGSQLIARSSFVAAGIFIILLIRSMQRVKNLDKIEKMI 741
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02567 741 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 111 685 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Fra11g02567 741 CDD ABC1-ADCK3-like 272 519 - -
Fra11g02567 741 Pfam ABC1 atypical kinase-like domain 272 518 IPR004147 -
Fra11g02567 741 SUPERFAMILY Protein kinase-like (PK-like) 274 607 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02567 K03688 ubiquinone biosynthesis protein
Fra11g02567 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:79301115 Fra12g01438 Fra-Chr12:17675039 dispersed
Fra Fra-Chr10:4701798 Fra11g02567 Fra-Chr11:79301115 wgd