Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fra11g02577	ATGGATTTCTCAGAATCTACAAAAGTCGTATACGATAGAGTACAAAAGATAGACCCCGAAAATGTCTCCAAGATCATCGGGTACCTTCTTTTACAAGATCATGGTGAACGTGAAATGATAAGATTAGCATTCGGTCCTGATAATCTAATACATGGTTTAATCAATAAAGCTAAAGCCAACCTTAAGTTACCTTCAAACACAACTGTTGGTCAACCGATTTCACCTCCTCAGGTGAACTCTATCCCTGATATGCCAATCGGCCCAATTCACTTCACACCGTTCTCTCCTTCAACCCGTCATTCACCATTAACGATCCAAGTTCCCACACGTTGTTGTGATCACCATGGTCAACCCGTTGACTTTGTTCCCATGGTTTACCCGGGCTCATTTCCTGAAGATTATGACCTTCACAACCAAATCCGTTTCATGTCTTTAGAAGATCAAATGGAGCCCGTTGACAGCCCGGATTTTCCCTCTAGTAATTACTACTCACCCGAGCCTGCATTGGGTCCTCGGGCCAATAGGAGGTCCCCAAGTTTACCCGAGTTTCCTTTCAAAGTTTGTCATTACTTCATTAAAGGGTTTTGTAGACATGGAAACAACTGTAGGTATTTGCACCCTACTCCCGAAAGCTTTTCACAAATCTTTAACTCTAAGTTGACCGAAGATGATAACGTCTTTTCGCCCATGTCACTTGAGAAACTAGAGCTAGAACTCACTGAGTTACTGAAATCAAGAAGAGGGTTTCCTGTTTCCATTGCTTCTTTACCAATGATATATTATGAAAAATTCGGTAAAACTCTTCAAGCTGAAGGATATTTGACCGAAAGTCAAAGACACGGGAAAGCTGGTTATAGTTTGACCAAACTTCTCGCTCGCCTCAAAAGCATTTGTCTCATCGATAGGCCACATGGGCAGCATGCGGTCGTGTTGGCTGATGACATGGCAAAATGCATGGACCATATTGGAGATAGAAACGAACATGGTGGAATTGTCGCGGGTTCTAGGCAGATATACTTGACTTTTCCTGCTGAAAGTACATTTTCTGAGCTTGATGTTTACAATTATTTCAACAAATTCGGGCCTGTTCGTGATGTGAGAATTCCATGTCAACAAAAGAGAATGTTTGGGTTTGTGACTTTCGTGTTTGCGGATACAGTTAGGCATATTTTAAACAAGGGGAACCCTCATTTTGTTAGTGGTGCGCGTGTTTTGGTCAAACCATACCGTGAAAAATGCAAGATTGATGATAAGAAACATGGTTACACATTTCAACATCATATGTACCAAGGTTCTCACTGTCTTGATAGTGAACTCGGGCTGCAATCAAGCAATGCTCATGCACAAGATGCAGACTTTCATTCTACTGAGCGTTTTAACTATTTTCTTGATGCTTTAAACAACGGTGCAGCTAGTGACCAACAGATTAGGCAGATTAATACCGAATACAACGAGCAAGAAAGTAGCCAGGGATTGAATCTTCCAGACAGCCCGTTTGCATCCGGATTAGCGGGTGAAATATCAACAGTTATATAG	1536	41.73	MDFSESTKVVYDRVQKIDPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHGLINKAKANLKLPSNTTVGQPISPPQVNSIPDMPIGPIHFTPFSPSTRHSPLTIQVPTRCCDHHGQPVDFVPMVYPGSFPEDYDLHNQIRFMSLEDQMEPVDSPDFPSSNYYSPEPALGPRANRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLHPTPESFSQIFNSKLTEDDNVFSPMSLEKLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDMAKCMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKIDDKKHGYTFQHHMYQGSHCLDSELGLQSSNAHAQDADFHSTERFNYFLDALNNGAASDQQIRQINTEYNEQESSQGLNLPDSPFASGLAGEISTVI	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fra11g02577	511	MobiDBLite	consensus disorder prediction	150	175	-	-
	Fra11g02577	511	Gene3D	-	183	265	-	-
	Fra11g02577	511	Pfam	RNA recognition motif	349	395	IPR000504	GO:0003723(InterPro)
	Fra11g02577	511	Gene3D	-	342	415	IPR012677	-
	Fra11g02577	511	ProSiteProfiles	OST-type HTH domain profile.	231	314	IPR025605	-
	Fra11g02577	511	SUPERFAMILY	RNA-binding domain, RBD	348	426	IPR035979	GO:0003676(InterPro)
	Fra11g02577	511	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	336	411	IPR000504	GO:0003723(InterPro)
	Fra11g02577	511	SUPERFAMILY	CCCH zinc finger	185	207	IPR036855	GO:0046872(InterPro)
	Fra11g02577	511	ProSiteProfiles	Zinc finger C3H1-type profile.	182	209	IPR000571	GO:0046872(InterPro)
	Fra11g02577	511	SMART	rrm1-1	337	407	IPR000504	GO:0003723(InterPro)
	Fra11g02577	511	SMART	c3hfinal6	184	208	IPR000571	GO:0046872(InterPro)
	Fra11g02577	511	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	343	414	-	-
	Fra11g02577	511	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	443	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fra11g02577	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	89467	Fra11g02577	Fra2g00869

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fra	Fra-Chr11:79372690	Fra3g00126	Fra-Chr3:4032724	dispersed
	Fra	Fra-Chr3:51473198	Fra11g02577	Fra-Chr11:79372690	transposed
	Fra	Fra-Chr10:4353896	Fra11g02577	Fra-Chr11:79372690	wgd
	Fra	Fra-Chr11:79372690	Fra2g00869	Fra-Chr2:59448894	wgd