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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02627 ATGATCTACCTCTTTTTCGCCGTTTTACTCGTCGAAATGGTGACGATTCTGCTGCTGTTGTTCAAAACCCCACTCCGGAAGCTTCTGATCATCGGATTAGATCGTGCGAAACGAGGAAGAGCTCCGTTGGTTGTCAAATCCGTCGGCGCCACCGTGTTTGTCATCATGATGTATAACGTTTATAGTGTAACGGAGATCCAGAGCCGTCCGGCGGACGTTATTAATCCTACAGATCAAGTTATTCTCGCTTATCACATGCTTGAAGCTTCTCTTATGGGATTCTCCCTTTTCCTATCACTAATGATAGATAGACTACATCACTACATAAGAGAACTTCGAATACTTAGAAAAACCATGGAAGCTACAAAGAAACAAAACAGAGCAGCTGAAGAAACCAAGAACAAGGGTGCAGATGAGGCTAAAATCCTAAATGATGAAATATCCAAACTAAAATCACATATTAAGAAACTCGAATCCGAACATGAGACAAAGGAAAAGGAGATCAAATCTGCAGAAGCTAATTCAGTTGCTCTCAAGAACCAATCAGAAGGCTTTCTTCTCGAATATGATCGCTTGTTAGCAGAAAACCAGAATCTTCGAGATCAATTGCGGGCCATTGATGACAACATGTCTCATTCTACTGGAAAGAAGAATATGTGA 660 41.21 MIYLFFAVLLVEMVTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPADVINPTDQVILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMEATKKQNRAAEETKNKGADEAKILNDEISKLKSHIKKLESEHETKEKEIKSAEANSVALKNQSEGFLLEYDRLLAENQNLRDQLRAIDDNMSHSTGKKNM 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02627 219 Coils Coil 105 181 - -
Fra11g02627 219 Gene3D - 136 199 - -
Fra11g02627 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Fra11g02627 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Fra11g02627 219 Coils Coil 189 209 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02627 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
89484 Fra11g02627 Fra2g00756
89485 Fra11g02627 Fra6g01181
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:79780066 Fra1g00446 Fra-Chr1:56350139 dispersed
Fra Fra-Chr2:61681073 Fra11g02627 Fra-Chr11:79780066 transposed
Fra Fra-Chr11:79780066 Fra6g01181 Fra-Chr6:61402948 wgd