AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02645 ATGGCTTCTTCTTCCAGTTGCAGCTTCATCTTCTTTGCTCTATTGCTTATACAATTTTGCAGTGCTCGTGAAATCGTGGACAAGAACCAAAACGACGATCACAACGAAGAAAATCGTATAAATTTATATGGGAATAATGGTGTTTATGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTACACGATTTATATTTGGGCAAAAAAATGCCAATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTCGATTGTTAACACGAGAACAATCTGACTCCATACCATTTTCCTCCAAAAAGCTCGCGTATCTTCTAGAACTTACATCATTACCCGAGGGTTCACCCCAAGCTCTAGCTATGGAGCAAACACTCAAACAGTGTGAGCTCGAGGCAACCCCTGGTGAGACGAGGTTCTGTGCTAGCTCGTTAGAGTCCATGCTGGACTCTACACGCGAGATATTGGGTATGGTCAAACTAAAAGCGTTGACCACCAATATCCGCAATTTGTCAAAAACCCTTTTGCAAGAGTACACCTTTTTGAAGGAGCCAATGGAGATTAATGTTTCTGATATGGTGGCATGTCACACTATGGCTTATCCTTATGCTGTTTTTTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATATCTTTAGGGGGTGAAAATGGAAATATAGTGGATGCTATTGCTGTTTGCCACATGGACACTTCGATGTGGGATAGTGACCACGTGGCGTTTCGTGTGCTCGGAGGCCACCCTGGCAGCTCGCCAGTGTGTCATTTTCTCCCAGCCGATAACATTGTGTGGATACCGTCACCATAG 828 43.0 MASSSSCSFIFFALLLIQFCSAREIVDKNQNDDHNEENRINLYGNNGVYDLDPALNVFFHVHDLYLGKKMPIYFAVNDPSTTPRLLTREQSDSIPFSSKKLAYLLELTSLPEGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDSTREILGMVKLKALTTNIRNLSKTLLQEYTFLKEPMEINVSDMVACHTMAYPYAVFYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWDSDHVAFRVLGGHPGSSPVCHFLPADNIVWIPSP 275
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02645 275 ProSiteProfiles BURP domain profile. 58 274 IPR004873 -
Fra11g02645 275 Pfam BURP domain 57 272 IPR004873 -
Fra11g02645 275 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 36 274 IPR044816 -
Fra11g02645 275 SMART BURP-2 56 274 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02645 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89488 Fra11g02645 Fra8g01146
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:79914840 Fra8g01145 Fra-Chr8:11494906 dispersed
Fra Fra-Chr11:79914840 Fra11g02647 Fra-Chr11:79934904 proximal
Fra Fra-Chr3:59669453 Fra11g02645 Fra-Chr11:79914840 transposed
Fra Fra-Chr10:1423742 Fra11g02645 Fra-Chr11:79914840 wgd