AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02651 ATGGCAGAAAAGCTCATACAAAGGCTTGAAGCCGCCGTATCGCGGCTCGAGTCGTTCTCCCGCGGCTCCCAGCCCCAAGCCGCCGCCGTTGACGCCGGCTCAGCCTCGTCGGAGCCGTCGATCGTCGCGTTTGACGATCTGATCGCCGAATACGTCGATAAGGTCTCCGATTCAGCGGAGAAGATCGGCGGAGAGATTAAGGATATCACGAAAGTTCTCCGGGAGGCTTTTTGCGCTCAGAAGGAGCTTCTCGTTAAGATCAAACAAACGCAGAAACCTGATGCTGGAGGAATGGCGGAATTTCTCAGGCCACTGAATGAAAAATTAACTGAAGCAAGTAGAATGACAGAAGGACCCCGTTCTGATTTCTTTAACCACTTAAGATCTGTTGCTGAAAGTCTAACAGCTTTAGCATGGATTGCATATACAGGAAAAAACTGCGGAATGAGCATGCCTATTGCACATGTTGAAGAATGTTGGCAGTCAGCTGAGTTTTACAATAACAAGGTTCTTGTAGAATACAGAAATAAAGATGCAAATCATGTGGAATGGGCAAAAGCTCTCAAGGAACTTTATGTACCAGGTTTAAGGGATTATGTTAAGAGTCACTATCCTTTGGGACCTGTATGGAGTGCAACAGGGGCAACTGTATCTGCTCCATCAAAGTCTTCTCAACCGGGTGCTCCTGCTGCTCCAAATCCCCCACCAGCCTCACTTGCCAGCTCATCATCTTCTTCGTCATCATCTTCATCGCGTCCAAAACAAGGAATGGCTGCTGTTTTTCAAGAAATTAGTTCAAAGCCTGTTACTGCTGGATTAAAAAAAGTTACAGACGATATGAAAACGAAAAACCGCACGGATAGAGCAGGATTTGTGAGTTCTGGTGAAAAGGAACCCCGCAAGAGTGTGCCAGCAGCTGCTAAAGTTGGTCCTCCAAAACTTGAGCTTGTAATGGGTCGCAAATGGGTTGTTGAGTACCAAATTGGCGTGAAGGATTTGTCGATTGATGATTGTGATCCAAAGCAAACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTTCAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACCAAAATGGGTGTTGTGTTTACGGACGTTGTCGCTGCTTTTGAGATTGTTAATTGCAGCAGTGTTGAGGTGCAATGTCAGGGTGCAGCCCCTACCATTTCAATAGACAACACAGCAGGCTGCCAACTGTACTTGAGCAAAGAATCTCTAGAATCTTCTATCACAACTTCCAAGGCAAGTGAAGTTAATGTGATGGTACCCGCCGAAGATCCTGATGCTGATCTGGCGGAACATCCTATGCCACATCAGTACATTCACACTTACCAGGATGGCCACTTCGTTACAACCCCCGTCTCCCACTCTGGAGGGTAA 1416 46.19 MAEKLIQRLEAAVSRLESFSRGSQPQAAAVDAGSASSEPSIVAFDDLIAEYVDKVSDSAEKIGGEIKDITKVLREAFCAQKELLVKIKQTQKPDAGGMAEFLRPLNEKLTEASRMTEGPRSDFFNHLRSVAESLTALAWIAYTGKNCGMSMPIAHVEECWQSAEFYNNKVLVEYRNKDANHVEWAKALKELYVPGLRDYVKSHYPLGPVWSATGATVSAPSKSSQPGAPAAPNPPPASLASSSSSSSSSSSRPKQGMAAVFQEISSKPVTAGLKKVTDDMKTKNRTDRAGFVSSGEKEPRKSVPAAAKVGPPKLELVMGRKWVVEYQIGVKDLSIDDCDPKQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTDVVAAFEIVNCSSVEVQCQGAAPTISIDNTAGCQLYLSKESLESSITTSKASEVNVMVPAEDPDADLAEHPMPHQYIHTYQDGHFVTTPVSHSGG 471
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02651 471 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 40 235 IPR036222 -
Fra11g02651 471 Gene3D - 310 470 IPR016098 -
Fra11g02651 471 FunFam Adenylyl cyclase-associated protein 310 470 - -
Fra11g02651 471 Gene3D - 40 215 IPR036222 -
Fra11g02651 471 MobiDBLite consensus disorder prediction 215 257 - -
Fra11g02651 471 MobiDBLite consensus disorder prediction 272 305 - -
Fra11g02651 471 MobiDBLite consensus disorder prediction 237 256 - -
Fra11g02651 471 MobiDBLite consensus disorder prediction 274 295 - -
Fra11g02651 471 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 311 470 IPR036223 -
Fra11g02651 471 Pfam CAP, N-terminal domain 44 206 IPR053950 -
Fra11g02651 471 SMART carp 349 386 IPR006599 -
Fra11g02651 471 SMART carp 387 424 IPR006599 -
Fra11g02651 471 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 469 IPR001837 GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Fra11g02651 471 FunFam Adenylyl cyclase-associated protein 40 215 - -
Fra11g02651 471 ProSiteProfiles C-CAP-cofactor C-like domain profile. 311 448 IPR017901 -
Fra11g02651 471 Pfam Adenylate cyclase associated (CAP) C terminal 311 468 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Fra11g02651 471 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Fra11g02651 471 Pfam CAP N-terminal conserved motif 3 35 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02651 K17261 adenylyl cyclase-associated protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr10:1684126 Fra11g02651 Fra-Chr11:79965719 wgd
Fra Fra-Chr11:79965719 Fra6g01101 Fra-Chr6:60402323 wgd