AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02742 ATGGCCACCGCAAAGCCCACCGGCCGTACGATCTCTCAACAAGCTTTCGACGAAATGGTAAAAGAGAACATAGACGATTTAGGTATGGAGCCAACGGAAGCCCTAAGCGACGCAATCGAAACGCTAACACTTCAAGGCGTAGATCTCTCCGGTATCGTTACCGATACACTCCCCGGAGAAACTAATCCTGTGATCCAATCGCTTGATCGAATTAAACAGTTGCAGTGTTCGGATTGGAGCGATGAGGCGGTGGTTGATGAGGTTCTAGGGTTGTTGGATGGTTTGATTGGAATGTGTCGTGGTGAGGGGTCTGGAAGTGGTGCAATTGCTGCTAGAAATGGAGGTGTGGAGTTGATGTGTTCTGTTTGCTCGAGAGTTGGTGATGGTGGCCGTGATTCAGTGCTTGTATCGGCTTTAGATGCGTTGGCTGTGTTTGTTCATGATCTTCAAAGTAGTGAAGCTTTTAGGCAAAATGGAGGACCAAAAATGTTGGTTGAGATCCTAACCAACGAAACTCAAAATGTGAAAATCTTGAACAGTGGTTTTTCTGTTGTTGCTGCCGCTTCAACTGGTAATGAGGTTATTAAGGAATCCTTTGTCGAGCTACACATAGATGAATTAATGGTTTCAATCATGAAGAAACATGCCAAGGGGAACATTCCCAGTTTATATGATGCTATTAGAGTGCTTTTGGCTGCAGATGATAACCGTGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAACTGGAATTGCTGAAGCTCTTGTGGAGTCATTAAAGGATGGAATTAGCTCACCAGGTCTTGTATCAGCAACAATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAAAATGGTGGCATAGATTCATTGCTCATTTGTATTGATGAATCTGGTTTACAAGGGAATAAAATTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCCATTGTTGAAAGAGGAGGGTTGAATAGACTCATCACACTTTCTAGCAGGCTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATTATATGCACCCTGTGTTTGCGATCACCTGCGAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATTCAATCAATGCAAAAGTTCCCTCACTCTTATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCTAGGAATCCAGAAAACAGGCCTGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGCCACAAAAGTTGTAGAGATGCAGCCGTTGCCGCCCTTAGAGATTTGGGGCTTGAAAATTACAATTCTTAG 1389 43.2 MATAKPTGRTISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGIVTDTLPGETNPVIQSLDRIKQLQCSDWSDEAVVDEVLGLLDGLIGMCRGEGSGSGAIAARNGGVELMCSVCSRVGDGGRDSVLVSALDALAVFVHDLQSSEAFRQNGGPKMLVEILTNETQNVKILNSGFSVVAAASTGNEVIKESFVELHIDELMVSIMKKHAKGNIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKTGIAEALVESLKDGISSPGLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDESGLQGNKIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSYQLQKNSCLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAVAALRDLGLENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02742 462 Gene3D - 240 459 IPR011989 -
Fra11g02742 462 PANTHER UNCHARACTERIZED 6 456 - -
Fra11g02742 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Fra11g02742 462 SMART arm-5 418 457 IPR000225 GO:0005515(InterPro)
Fra11g02742 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
Fra11g02742 462 Gene3D - 68 239 IPR011989 -
Fra11g02742 462 SUPERFAMILY ARM repeat 119 456 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02742 K24166 armadillo repeat-containing protein 6