AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra12g01592 ATGAGAGAACCCACCACCGACAACAACCACAGCAACGCATCGTCGTCGCCACCACCTCCGCCACCGCAGGCTCTGCTTGAAAGACTCAAAGATTATGGTCAAGAAGATGCTTTTGCCTTCTGGGATCAACTCACATCCGACCAACAGAACTTTCTTGTTCAAGAAATTGAGAGTTTAGATCTTCCTAGGATTGATCGAATGATTCGCTGCTCGTTTCAGTCACATGGGCTGCCAGCGGCCGCCATAGAGCCGGTGCCAGAAAGCTTTGTGTCAACTGTGGAGGACAGAAAGCTTGAAGAAAGAGAGAAATGGTGGAAAATGGGGTTGAATGCTATTTCAGATGGAAAATTGGCTGTATTGCTTTTATCCGGTGGACAGGGGACACGGCTTGGAAGTTCTGCCCCAAAAGGATGTTTTAATATTGGACTTCCATCTGGAAAGTCACTTTTCCAGCTTCAGGCTGAGCGAATTCTGCGCCTCCAACGATTAGCAGCTCAATCACTTGACGGGGGTTCTGGTAATGTTGTACCAATACATTGGTACATAATGACCAGCCCGTTTACTGATAAAGCCACACGTGATTTCTTCAAAAGTCACAAGTATTTTGGACTTGAAACCGATCAGGTTACATTTTTCTCACAAGGCACGATACCTTGTGTCTCAAAAGATGGTAGATTTATCATGGAAACCCCGTTCCAAGTGGCAAAAGCACCTGATGGGAACGGAGGAGTTTATTCAGCATTGAAGTATTCAAGACTATTAGAAGATATGTCCACAAGAGGGGTCAAATATGTGGATTGTTATGGAGTTGACAATGCTTTGGTTCGTGTTGGAGATCCTACTTTCTTGGGGTATTTCATTGATAAGGGTGTAGCTTCTGCTGCTAAAGTTGTCCGTAAGGCATACCCTCAAGAAAAGGTTGGTGTATTTGTAAGGCGTGGTAAAGGCGGACCTGTAACTGTTGTTGAATACAGCGAGTTGGATCAGTCGCTTGCAAGTGAAATTAACCAGGGAACTGGCCGACTTCGTTACTGTTGGAGTAATGTTTGCCTTCATATGTTCACTTTGGACTTTCTGAACCAAGTTGCCAATAGTCTAGAAAAGGACAGCATATACCACCTTGCTGAGAAGAAAATCCCATCGATCCATGGTCAAACAGTTGGATACAAGCTTGAGCAGTTCATATTTGATGCATTTCCATACGCGCCTTCAACAGCACTTTTTGAGGTGTTGCGTGAAGAAGAATTTGCCCCTGTGAAAAATGCAAATGGGTCAAACTTTGACACTCCAGACAGTGCACGGCTTCTGGTTCTTCGTCTGCATACACGCTGGGTGGTTGCAGCTGGTGGCTTCTTAACACACTCAGTACCTTTGTATTCTACTGGTGTTGAGGTTTCACCACTTGTTTCATATACTGGAGAAAATCTTGAAGCAATCTGTCGTGGTAGAACATTCCATGCGCCTTGTGAAATCACATTCTAG 1482 44.74 MREPTTDNNHSNASSSPPPPPPQALLERLKDYGQEDAFAFWDQLTSDQQNFLVQEIESLDLPRIDRMIRCSFQSHGLPAAAIEPVPESFVSTVEDRKLEEREKWWKMGLNAISDGKLAVLLLSGGQGTRLGSSAPKGCFNIGLPSGKSLFQLQAERILRLQRLAAQSLDGGSGNVVPIHWYIMTSPFTDKATRDFFKSHKYFGLETDQVTFFSQGTIPCVSKDGRFIMETPFQVAKAPDGNGGVYSALKYSRLLEDMSTRGVKYVDCYGVDNALVRVGDPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKGGPVTVVEYSELDQSLASEINQGTGRLRYCWSNVCLHMFTLDFLNQVANSLEKDSIYHLAEKKIPSIHGQTVGYKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVVAAGGFLTHSVPLYSTGVEVSPLVSYTGENLEAICRGRTFHAPCEITF 493
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra12g01592 493 FunFam UDP-N-acetylglucosamine diphosphorylase 2 19 489 - -
Fra12g01592 493 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 22 491 IPR039741 GO:0003977(PANTHER)|GO:0006048(PANTHER)
Fra12g01592 493 CDD UDPGlcNAc-PPase 102 423 - -
Fra12g01592 493 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 489 IPR029044 -
Fra12g01592 493 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 491 IPR029044 -
Fra12g01592 493 MobiDBLite consensus disorder prediction 1 25 - -
Fra12g01592 493 Pfam UTP--glucose-1-phosphate uridylyltransferase 66 449 IPR002618 GO:0070569(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra12g01592 K00972 UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]