AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra13g00683 ATGCCAAAAACGGTTCCATCGCTACAAGAAAACAAAAAACCATTCCACCGGAGGAATGGTTCAGACGAGATTCATGTCTTTGAATCTGCACGGTTCTTTGAAAGCACCAGCACCACCCTCGCTCATAAACATTACATGAGAGAGGGTGGTGGAAGGCTGAGTCTTGATATTCCCAACACGAGAAGAAACTCGATTCCATTACAAGCCATGTTGATGGAGAACCGAAACTCGGTTCCTTTACAAAGCATGATAATGGATCAAAACCCTATGATGGTCAAGAATGATAAGAAGCATAAACAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAATTCTCTCTTCAACCAAACATCTTCAAAGAAGTCAAAGTCCAAGTCAAAGTCAACAACACCAACACATTCTAAGAAAGATGAAGATGAGAGCCCTAGTGGTTGGAGAAGAAGAAGGAGGAGTAGCATTAGTCTTTTCAGGAGTGGAAACAGTAATTCCAACATTAATGTAAGTGACACAAAATCTTCTTATTCAAGAACACTACCACAAGCACCCACAAAGAGTACAACTTATAAAGATCACAGACCCAATTCAGACCAAAAGCCTACATGTGAAATTACCAAAATACCCATCATTGAAAACAACAACAAGAATGAAACCCTAATGACCAAAAGTGGGTTTCTTGATCAAAAAAGAAGTTCTGGAAATGGGTTATTGGAGAAAGTTAGGGTTTGTGATGTAAAACATGATGATGATCATCATCAGAAGCATGATCCAACGGTGGAGATTAAAGAACTCAAAAGTTTCATTCTTGATGATGATGGTGGAGACAGTGATTCAAGTTCTGATCTTTTTGAGTTAACAAACTGTGATTTGGGTTATTATTCAAGTGGTTTGCCAGTTTTTGAAACAACCCATATGGATAGCATCAAGAGGGGTGCACCAATCTCTAGCTAA 954 39.31 MPKTVPSLQENKKPFHRRNGSDEIHVFESARFFESTSTTLAHKHYMREGGGRLSLDIPNTRRNSIPLQAMLMENRNSVPLQSMIMDQNPMMVKNDKKHKQPSSPGGKLAHFLNSLFNQTSSKKSKSKSKSTTPTHSKKDEDESPSGWRRRRRSSISLFRSGNSNSNINVSDTKSSYSRTLPQAPTKSTTYKDHRPNSDQKPTCEITKIPIIENNNKNETLMTKSGFLDQKRSSGNGLLEKVRVCDVKHDDDHHQKHDPTVEIKELKSFILDDDGGDSDSSSDLFELTNCDLGYYSSGLPVFETTHMDSIKRGAPISS 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra13g00683 317 MobiDBLite consensus disorder prediction 1 21 - -
Fra13g00683 317 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 80 310 IPR039621 GO:0009734(InterPro)
Fra13g00683 317 MobiDBLite consensus disorder prediction 132 149 - -
Fra13g00683 317 MobiDBLite consensus disorder prediction 117 202 - -
Fra13g00683 317 MobiDBLite consensus disorder prediction 156 190 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra13g00683 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89958 Fra13g00683 Fra14g01147
89959 Fra13g00683 Fra1g01603
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr1:76772983 Fra13g00683 Fra-Chr13:34037206 wgd
Fra Fra-Chr13:34037206 Fra14g01147 Fra-Chr14:42265516 wgd