Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra13g01398 | ATGCTCAATATCTTCAACAAAAACCTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTGCAAAGCCCAAAGTCATCATCAAAAGGTTCGGAAAGTCAAACTCTAGAGGTCAAGATTCATCAATCACAAATGGGTCAGCGACAATTCACCCAAATAATCACTTGGGTGTTTCGAAATCTGAAAACCCAATTCGAATTGCAACGTTTAATGCTGCTTTATTCTCCATGGCACCAGCAGTTCCAGAGTTGACTAAAAAAGGCTCAAGCTTTGACTATGGCGAAGATGATAAAGATTACACCAAGGTAACCTCTGATTCTTCAGTTTCTTACGGTAATTCGAGATCAAAATCAATGGTTGATCGACCCAAAAGTATATTGAAACAATCACCATTGCATTCAAGCTCCATTGGTAGCTCAGAAACTCAATCAAAACAGCAGAAATTTGCAAAGTCAAAGCTGAGAGTGTCTATTAACTTACCTGATAATGAGATCTCATTGAGGCGAAGTGGGCAATTGAGCTTTGTTTTAGATGAAAACGAAACTGACCCGAGTTCGAAAACTAGTAGTTCTAAGGGTATAAGCAAGATTTTGAAAGGAAAGGGTGTTTTGAGATCACAAAACAGTTTTTCTTCAAGAGAAGTTGAAAGTCAAAGGGGAAGTTATCGGTCAACGAAGACTGTTCTTGAGGTTTTGAGAGAATTGGATGCAGATATACTGGCTTTACAGGATGTAAAAGCTGAAGAAGAAAAAGATATGAAGCCATTATCTGATCTTGCTGCTGCTTTGGGTATGAATTATGTTTTTGCAGAGAGTTGGGCACCTGAATATGGTAATGCAGTGCTATCGAAATGGCCGATTAAACGATCCAAGGTTCAGAAGATTTTCGATGATTCTGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTTCCACAAACCGGAGAAGTTGATTTTCATTGCACCCTTCTTGATCATCTTGACGAGAATTGGCGAATGAAACAGATAAATGCAATAATTGAATCTAATGACAGACCACACATCTTAGCTGGAGGCATCAACTCTCTTGATGAAACAGACTACTCGCCCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGGACAAACAGTACAGCGACGCTAAGGATTGTGCAGGCGAATGCGAATCTGTGGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACTTGCAAATACGGTACAAGGGTAGATTACATATTGGTGTCCCCTGATTCTCCCTACAAGTTTGTTCCTGGTTCATATATGGTTCTATCATCAAAGGGTACTTCTGACCATCATATAGTCAAAGTTGATGTAACTAAGGTAGATGAATCCGGTCAACAACCGTACGTTAGGAGGCCGCAACGACACCCTAAACAAAAAGTTGTGAAGATTATGAATTCTAATTCATCAAAAGGGGTATGGAAAATGCAAACTTTAGACAGATAG | 1524 | 40.35 | MLNIFNKNLRRLCSKLRWPVRRRAKPKVIIKRFGKSNSRGQDSSITNGSATIHPNNHLGVSKSENPIRIATFNAALFSMAPAVPELTKKGSSFDYGEDDKDYTKVTSDSSVSYGNSRSKSMVDRPKSILKQSPLHSSSIGSSETQSKQQKFAKSKLRVSINLPDNEISLRRSGQLSFVLDENETDPSSKTSSSKGISKILKGKGVLRSQNSFSSREVESQRGSYRSTKTVLEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQINAIIESNDRPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKDKQYSDAKDCAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVTKVDESGQQPYVRRPQRHPKQKVVKIMNSNSSKGVWKMQTLDR | 507 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra13g01398 | 507 | MobiDBLite | consensus disorder prediction | 104 | 155 | - | - | |
| Fra13g01398 | 507 | MobiDBLite | consensus disorder prediction | 130 | 155 | - | - | |
| Fra13g01398 | 507 | Gene3D | Endonuclease-exonuclease-phosphatase | 210 | 466 | IPR036691 | - | |
| Fra13g01398 | 507 | SUPERFAMILY | DNase I-like | 227 | 464 | IPR036691 | - | |
| Fra13g01398 | 507 | MobiDBLite | consensus disorder prediction | 35 | 59 | - | - | |
| Fra13g01398 | 507 | Coils | Coil | 234 | 254 | - | - | |
| Fra13g01398 | 507 | PANTHER | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | 15 | 463 | IPR051916 | GO:0005783(PANTHER)|GO:0006506(PANTHER) | |
| Fra13g01398 | 507 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
| Fra13g01398 | 507 | Pfam | Endonuclease-Exonuclease-phosphatase family | 222 | 457 | IPR005135 | GO:0003824(InterPro) | |
| Fra13g01398 | 507 | MobiDBLite | consensus disorder prediction | 106 | 122 | - | - | |
| Fra13g01398 | 507 | FunFam | Endonuclease-exonuclease-phosphatase family protein | 214 | 467 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra13g01398 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 393626 | Fra13g01398 | Fra18g01510 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr13:42246438 | Fra8g00701 | Fra-Chr8:6230131 | dispersed | |
| Fra | Fra-Chr13:42246438 | Fra18g01510 | Fra-Chr18:59935283 | wgd |