AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra13g01442 ATGCAACAAATCATGAAAACCAAATCAAGATCAGAAGTGAGCCGAAGAGCGTGGCAAATACTCCGGTTAGCCTTATTATGGGCCCGAAAAGGCGGAGTCTTTGTGCTCAAGAAACGCCTTATGCACGACATATCACATATCCTCAAGAACCATGGTCACTCGAAAAAAGACAATGGTGCACTACAATATGGTGATCGTCAACTATCGTTTGATGCAACCCCTATCATACATGTGCGAATGCATCGCCCTAACTCAATGCGCTTTCGCTTGCCTCATATCCCTTGCATCAACCCACACGTCGATTGTTCGGATATCTTTGATCAGTTTGATGATGAGAGTGTTAGGTACTCGTGTTGTGAGGCGAGAAAGAGTTTCTTGATCGCGAATGGTGATGAACATGACGAAAAAGATTATGATGATGATGAATGTGATCAGTTTTGTGAGGAACAAGAAAATGGAATTGATCTTAAGGCTGAACAGTTTATAGCCCACTTCTATGAGCAACTTAAGCTTCAAAGGAACCTCAACACAAGAAAAAGTGACTAA 546 42.12 MQQIMKTKSRSEVSRRAWQILRLALLWARKGGVFVLKKRLMHDISHILKNHGHSKKDNGALQYGDRQLSFDATPIIHVRMHRPNSMRFRLPHIPCINPHVDCSDIFDQFDDESVRYSCCEARKSFLIANGDEHDEKDYDDDECDQFCEEQENGIDLKAEQFIAHFYEQLKLQRNLNTRKSD 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra13g01442 181 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 12 176 - -
Fra13g01442 181 Pfam Cotton fibre expressed protein 152 173 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra13g01442 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
393640 Fra13g01442 Fra18g01744
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2487066 Fra Fra13g01442 Fra-Chr13:42675427 Fra18g01744 Fra-Chr18:65770274