AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01363 ATGTCAAGGCTCTACGTGATCAGAAATACTAGGAGAGCAGCGCAGGTGGTTCGAACAAGCAATTGGGGTATTCATTCAGAAGATGGGTCAATCGTTAGATCTGGTTTTAACAACTTCAAATACAGGATGTACTCTAGTAATAAAGGGTTTGCTTCCATCTTGGCATGCAAATCCAAGTTTTCTGTAGGCAAGAATACATTCTGCAGCAGAAACTTTTCCTCTTATTCAGCCAATAACACAATAACACATCATGCCCAACATGCTTGGAGGAGGCTTTTTAATAGTTTGGATCGAGATAAGCAACTTTCTGGCATAAATAGAATCGCTCAAGCATTTAGTTTGGCATTGAGTCGCTCATATGTTGTTCTTCCTTGTATATTTGCCTTCACATGTGGCAATATGGTGTTAGCAGATTCTGGGTCAAATATTGGCTCTTTTCAACCAAGAAATACTTTATACACACGCGCTGAAAATGGACACGCGTTCTTGATCTCATCATTGGTTTCAGTATTCGAAGGTTTCATATTGCTGTTCAGAGCTATGTATTTGGCAATTTTGTTCTCACCCAGTATGGCAATGGCTCCGTTTGCAGAGTATTTTGGGACCTCATCCAGACAACAATGGCTTCATCTCGTACGCCGTACTTTAGAAATAGCAGGTCCTGCATTTATTAAATGGGGTCAATGGGCCGCCACACGGCCAGACCTTTTCCCTACAGACTTGTGCACGGAGCTCTCTAAGCTTCATAGCAAGGCTCCTGAACATAGCTTTGCTTATACAAGAAAGACGGTTGAAAAGGCTTTTGGTCGTAAAATTTCAGATGTTTTTGATGATTTTGAGGAAGTTCCGGTAGCTTCAGGAAGCATTGCACAAATTCATCGAGCTTCTTTGAGATTGGGATATCGTGGCAAGCGTGACAAGCCTCTATTAGTTGCAGTTAAAGTTAGACATCCTGGGGTTGGTGAATCAATTAAAAGAGATTTTGAGATTATTAATGTAGTTGCAAAGATATCTAAATTTATTCCTACACTTAATTGGTTGAGATTAGATGAAAGTGTTCAACAGTTTGCAGTCTTTATGATGTCACAAGTCGATCTTGCTCGGGAAGCTGCTCATTTGAGTAGATTTATATATAATTTTCGCAGCTGGAGGGATGTTTCTTTCCCTAAACCTGTATATCCACTTGTACATCCTGCTGTTTTGGTGGAAACTTTTGAACAAGGTGAAAGTGTATCACGTTATGTTGATGAACTTGAAGGACATGTTCGACTTAAGAGTTCTCTGGCACACATTGGGACCCATGCTCTTCTAAAAATGCTGCTGGTGGACAACTTCATTCATGCTGACATGCATCCTGGAAATATTCTTGTGAGGAGCAAACCTTCTCGTAAAGGGATCTTCAAATCGAAGCCGCATGTTATATTCCTTGATGTAGGCATGACTGCTGAACTATCAAAGAGTGATAGAGTCAATCTGTTGGAATTTTTTAAGGCTGTTGCTCGTAGAGATGGAAAGACTGCAGCAGAGTGCACATTGAGGCTTTCAAAACAACAGAATTGTCCTAATCCTCAGGCCTTTATCAAGGAAGTTACCGAGTCTTTTGATTTTTGGGGTAGTCCAGAGGGTGACATTGTACATCCTGCTGATTGCATGCATCAAGTGCTAGAGCAAGTGAGACGTCACAGAGTCAATGTTGATGGAAATGTCTGCACTGTCATGGTTACAACTCTGGTTCTTGAGGGTTGGCAACGGAAGCTTGACCCTGATTACGATGTAATGCACACGCTTCAAACATTGTTGCTGAAAGAAGACTGGGCAAAGTCACTAACCTACACAATTGAAAGCTTGATGGCTCCATAG 1860 41.29 MSRLYVIRNTRRAAQVVRTSNWGIHSEDGSIVRSGFNNFKYRMYSSNKGFASILACKSKFSVGKNTFCSRNFSSYSANNTITHHAQHAWRRLFNSLDRDKQLSGINRIAQAFSLALSRSYVVLPCIFAFTCGNMVLADSGSNIGSFQPRNTLYTRAENGHAFLISSLVSVFEGFILLFRAMYLAILFSPSMAMAPFAEYFGTSSRQQWLHLVRRTLEIAGPAFIKWGQWAATRPDLFPTDLCTELSKLHSKAPEHSFAYTRKTVEKAFGRKISDVFDDFEEVPVASGSIAQIHRASLRLGYRGKRDKPLLVAVKVRHPGVGESIKRDFEIINVVAKISKFIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRSWRDVSFPKPVYPLVHPAVLVETFEQGESVSRYVDELEGHVRLKSSLAHIGTHALLKMLLVDNFIHADMHPGNILVRSKPSRKGIFKSKPHVIFLDVGMTAELSKSDRVNLLEFFKAVARRDGKTAAECTLRLSKQQNCPNPQAFIKEVTESFDFWGSPEGDIVHPADCMHQVLEQVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPDYDVMHTLQTLLLKEDWAKSLTYTIESLMAP 619
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01363 619 SUPERFAMILY Protein kinase-like (PK-like) 255 587 IPR011009 -
Fra18g01363 619 CDD ADCK2-like 247 537 IPR044095 -
Fra18g01363 619 PANTHER AARF DOMAIN CONTAINING KINASE 2 (PREDICTED) 11 611 IPR052402 -
Fra18g01363 619 Pfam ABC1 atypical kinase-like domain 247 509 IPR004147 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01363 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr18:48960947 Fra8g00930 Fra-Chr8:8655023 dispersed
Fra Fra-Chr18:48960947 Fra7g01247 Fra-Chr7:66452265 wgd