Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra18g01438 | ATGGAAGAACAGGTGGGAAGGGCATTTGTGGAACACTATTATCATTTATTTGATACAGATAGATCATCTCTTGCTACACTTTATCATCAATCTTCCATGTTGACTTTTGAAGGTCAAAAGCTACAAGGTGTTGATGCTATATGTTCCAAGATCAATCAATTACCTTTTGACAAATGCCAACATCTCATTAGCACCATTGACGCGCAACCATCGTCGTTTGTTGGAGGTATCGTGGTGTTTGTTAGTGGAAGCCTTCGACTCAACTGCGAAGAACACCCTCTTCGGTTTAGCCAGATGTTTCACTTGATTCCCACGCCACAAGGAAGCTTCTATGTGCAAAATGACATTTTTCGTCTCAATTACGGTTAA | 369 | 40.65 | MEEQVGRAFVEHYYHLFDTDRSSLATLYHQSSMLTFEGQKLQGVDAICSKINQLPFDKCQHLISTIDAQPSSFVGGIVVFVSGSLRLNCEEHPLRFSQMFHLIPTPQGSFYVQNDIFRLNYG | 122 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra18g01438 | 122 | CDD | NTF2 | 3 | 121 | IPR018222 | - | |
| Fra18g01438 | 122 | FunFam | Nuclear transport factor 2 | 1 | 122 | - | - | |
| Fra18g01438 | 122 | Pfam | Nuclear transport factor 2 (NTF2) domain | 5 | 119 | IPR002075 | - | |
| Fra18g01438 | 122 | PANTHER | NUCLEAR TRANSPORT FACTOR 2 | 3 | 121 | IPR045875 | GO:0006913(InterPro)|GO:0006913(PANTHER)|GO:0044613(PANTHER) | |
| Fra18g01438 | 122 | Gene3D | - | 2 | 122 | - | - | |
| Fra18g01438 | 122 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 5 | 119 | IPR018222 | - | |
| Fra18g01438 | 122 | SUPERFAMILY | NTF2-like | 3 | 120 | IPR032710 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra18g01438 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr18:56909024 | Fra9g00476 | Fra-Chr9:4022398 | dispersed | |
| Fra | Fra-Chr18:56909024 | Fra7g02098 | Fra-Chr7:78588947 | transposed | |
| Fra | Fra-Chr18:56909024 | Fra7g01722 | Fra-Chr7:74577277 | transposed |