AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01491 ATGAGAATGAAGGTTTCGTTCGCCTTCACGTGGTCTTCTGCTGCTCGTGCGTCGGTGTTTCTTCTGCTTCTCGCTACCTTCGCTTTTGCGTGCTTCTCTCTCCCGATTGAAAAGATTTTGAAGAACTTTTTGCTCTGGATTAAGGAAGAGTTGGGTCCTTGGGGTCCACTTGTTCTTGCCATTGCTTATATTCCTCTTACAGTGTTTGCGGTTCCAGCCTCAGTGCTTACGCTTGGAGGGGGGTATCTCTTTGGACTGCCAGTAGGATTTGTTGCTGATTCAATTGGTGCGACCCTTGGTGCAACAGCTGCTTTCCTTGTTGGCAAGACGATAGGACGGTCTTATGTCATTTCTAAGTTGAAGAAATATCCCAAGTTCCAGGCTATAGCTATTGCAATACAAAGATCCGGCTTCAAGATTGTTTTGCTGCTTCGTTTTGTCCCATTGCTTCCATTCAATGTCTTGAATTACCTGCTGTCCGTTACTCCTGTTCGCTTGTGGGAGTATATGTTGGCCACTTGGCTGGGGATGATGCCAATCACATTCATGTTCGTGTATATTGGAACAACTCTCAAGGACATTTCTGATGTTACACATGGATGGCATGAGATATCAAAAACTCGTTGGATGTTTATGGCTTTTGGGCTCTCAATATCAGTGATCATGATCGTTTTCATCATTAAAGTCGCAAAAGCTTCTCTGGAAAAAGCACTAGCTGAACATGGTGAGATAGACGCCATAGATTTAGCTTCACCCGGGCTGCCTATTGTAGCCGATTCAGCCCTCGGTCTCCACAGACCGTTGATAACTACAGTGGACTCGACTGTAGATGATCTTGTCTGA 843 45.31 MRMKVSFAFTWSSAARASVFLLLLATFAFACFSLPIEKILKNFLLWIKEELGPWGPLVLAIAYIPLTVFAVPASVLTLGGGYLFGLPVGFVADSIGATLGATAAFLVGKTIGRSYVISKLKKYPKFQAIAIAIQRSGFKIVLLLRFVPLLPFNVLNYLLSVTPVRLWEYMLATWLGMMPITFMFVYIGTTLKDISDVTHGWHEISKTRWMFMAFGLSISVIMIVFIIKVAKASLEKALAEHGEIDAIDLASPGLPIVADSALGLHRPLITTVDSTVDDLV 280
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01491 280 Pfam VTT domain 71 189 IPR032816 -
Fra18g01491 280 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Fra18g01491 280 PANTHER UNCHARACTERIZED 11 266 IPR015414 GO:0016020(PANTHER)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01491 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr18:59619131 Fra5g01322 Fra-Chr5:52923030 wgd