Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fra18g01507	ATGTCGCCGGCAGCCGGCGTTTCTACGGTGGCCGATCGAGTGCCGGTGGTGATGCCGGCGACCGCGGCGGTGATGCCGGAGGCGTTCGCTAAGGACGCGATAATCTCGTGGTTCAGAGGCGAGTTCGCGGCGGCGAACGCCATCATTGATGCGTTGTGTAGCCATTTGTCGCAGTTTGAAGGCGGAAAAAGCGAGTATGAATCGGTGTTTGCCGCCATACATCGTCGTCGGTTGAATTGGATCCCGATTTTGCAGATGCAGAAGTATTTCTCCATCGCTGATGTGGCTTTGGAGCTTCAGAAAGTGACCGAAATGAAGGTGAAATCAATCGGCGTTGAGAAAGTCGTTGACGAAAACGCTAATCCTCCGGCGCCGGTGCCGGTGGCGGAGACGGTGGCGGAGACGGTGACGGAGACGAAACGTGAAGTTTTGGTGGAGGAATCCGTTGATATCAATGGAGACGACGGTGGTGAGGTGGTTGTTGATGATGATTCTACTAAGGATAACAATTCGCCGAAGAGCGGGATCACAGATGCAGGATTACAGGAAGTGCATTCGACGGTTGAAAGCACTGAGATGTGCCCAAGTGAAGAAGATTGGGAAGCCCGGCGTGCTGAAATCAAGATGACAAAAGGGTTCATAGCCAAGGAGTCTGTAAAAGGGCATATGGTGAATGTCGTGAGGGGTTTGAAGTTGTATGAGGACATACTCAACAACGACGAGCTATCTAAGTTGACTGAATATGTAACTGAACTCCGAGTTGCTGGCCAAAATGGTGAACTCTCAGGTGAGACATTTATAATGTACAACCAACAATCGAAGGCAATCAAAAGAGAGCTACTTCAGTTTGGAGCTCCTATTTTTGGACAGATAAAAGATGAAGCTACAAATAATAAGTCCCAAGATAGCAATATAGAGCCAATTCCTGCTCCTCTTGAAGATGTCATAGACCATCTAATTCAATTTCGCTTAATATCTGAAAATCGCCGACCAAACAGTTGCATTATAAACTTTTTCGATGAGGGTGAGTTTTCACAACCTTTCTTGAAACCACCTCATTTAGAGCAACCCATCTCCACACTTGTTCTGTCTGAATCAACAATGGCTTTTGGGCGTACACTAGTATGTGATAATGATGGAAACTATAAAGGACCACTCATGCTTTCTCTCAAGGAAGGGTCACTCATAGTGATGAGAGGAAATAGCGCTGACATGGCACGCCACGTCATGTGTCAATCTCCAACTAAACGAATCAGTGTCTCGTTTTTCAAAGTCCGAATAGACACGTATGGCAAAAATCCACCACCTAAAGATCTCATGGCGGGAGCAATGACCGTATGGCAGCCAAATCTAACAACTCCATTGATCACACCAACAACCGGACCACTCGACGGGTATGACTCAATTCACATTCTCCCCAAATGGGGTGCAATCCGTGCCCCACAATTGCTTATGTTAGCACCAGTCCGTCCAATGGTCATGAGCCCTAGAAGGCTGCCACGTGGAGGGACTGGTGTTTTCTTACCATGGAATGGCGGTTCAAAAAAATCTGCTAAGCACCTACCACCTCGTGCTCAAAGAGGGCGTCTTCTTGCACTACATGCCTCAACCGAAGCACACAAAATAGATCGAACCCCTGAATCCCCGATAAGCGTCACCTGA	1662	47.95	MSPAAGVSTVADRVPVVMPATAAVMPEAFAKDAIISWFRGEFAAANAIIDALCSHLSQFEGGKSEYESVFAAIHRRRLNWIPILQMQKYFSIADVALELQKVTEMKVKSIGVEKVVDENANPPAPVPVAETVAETVTETKREVLVEESVDINGDDGGEVVVDDDSTKDNNSPKSGITDAGLQEVHSTVESTEMCPSEEDWEARRAEIKMTKGFIAKESVKGHMVNVVRGLKLYEDILNNDELSKLTEYVTELRVAGQNGELSGETFIMYNQQSKAIKRELLQFGAPIFGQIKDEATNNKSQDSNIEPIPAPLEDVIDHLIQFRLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTLVLSESTMAFGRTLVCDNDGNYKGPLMLSLKEGSLIVMRGNSADMARHVMCQSPTKRISVSFFKVRIDTYGKNPPPKDLMAGAMTVWQPNLTTPLITPTTGPLDGYDSIHILPKWGAIRAPQLLMLAPVRPMVMSPRRLPRGGTGVFLPWNGGSKKSAKHLPPRAQRGRLLALHASTEAHKIDRTPESPISVT	553

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fra18g01507	553	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	28	538	IPR044842	GO:0003729(InterPro)\|GO:0006402(InterPro)\|GO:0032451(InterPro)
	Fra18g01507	553	SUPERFAMILY	Clavaminate synthase-like	222	422	-	-
	Fra18g01507	553	Gene3D	-	214	429	IPR037151	-
	Fra18g01507	553	MobiDBLite	consensus disorder prediction	154	178	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fra18g01507	K10767	mRNA N6-methyladenine demethylase [EC:1.14.11.53]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	393628	Fra13g01401	Fra18g01507

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fra	Fra-Chr14:44494775	Fra18g01507	Fra-Chr18:59896101	dispersed
	Fra	Fra-Chr18:59896101	Fra9g01392	Fra-Chr9:19539610	dispersed
	Fra	Fra-Chr6:56661740	Fra18g01507	Fra-Chr18:59896101	transposed
	Fra	Fra-Chr11:6535869	Fra18g01507	Fra-Chr18:59896101	wgd
	Fra	Fra-Chr13:42275376	Fra18g01507	Fra-Chr18:59896101	wgd