AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01516 ATGTCATCAATTGGGTTGAGTTTTCTCAAAGTTCTTGAGAACCCATCAATGGGTTCCAAGAATCTTGACCAAAACGACGAAGTTTACGTCCATCCGATGACGAAACGATCCGCATCGGCATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTAGGAAGTGAAACTGGGAGTGATGTGAGTGAAAGTGGTGATGAATTCTCATTCTCTTCAATTTCAATGGCTGAAAGAGAGAGATTGAGGTCAATTCAAAAGTCAAACCACCGGAGTTATGACCGGAAAATTCGCCGGAATGACTTTCCTCCGCCGTTGACCTCCATCAGCGGGTCCCACGGGGCGGTGAAGGTGAGACACCACCGTGAAGGTGGACGTTTGGTTATCAAAGCTGTGAGCTTTTCTAACCGTGGTACAAATTTTCAAGCTGAACGTACAAATGGGAGACTCAAGCTTTCATTGTTGAGGGACTGTTGTGTAAATTATGAAAGTGGAAGGGTTGAAATGGAAGAATATGAAAGTGAGAGGGTTGAAATGGAAGAATATGAAAGTGAAAGGGTTGAAATGGAAGAATATGAAAAAGGTGGTGAAGTGGAATATGACGATGATGATGACGAGGAGGTGGGCGTGGTGGTGGAGGAGGAGGCAGAGGACGGTGGTTCCGGTGGTGGTTGGCGGTGGGATATGGATGGAAACCGCTGGCGGCTCGCCGGAAAAGGAGAGTTAAAGATGCTAACGAGGTGTAAGGAGGGTGGAGATGGGAACAAAGTGTTTGCAAATTGGGGTTCATCTTGGGTGGCAATATCTTAA 807 46.22 MSSIGLSFLKVLENPSMGSKNLDQNDEVYVHPMTKRSASALSTKSLEMCTESLGSETGSDVSESGDEFSFSSISMAERERLRSIQKSNHRSYDRKIRRNDFPPPLTSISGSHGAVKVRHHREGGRLVIKAVSFSNRGTNFQAERTNGRLKLSLLRDCCVNYESGRVEMEEYESERVEMEEYESERVEMEEYEKGGEVEYDDDDDEEVGVVVEEEAEDGGSGGGWRWDMDGNRWRLAGKGELKMLTRCKEGGDGNKVFANWGSSWVAIS 268
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01516 268 Pfam Fantastic Four meristem regulator 100 153 IPR046431 -
Fra18g01516 268 MobiDBLite consensus disorder prediction 85 100 - -
Fra18g01516 268 Coils Coil 171 191 - -
Fra18g01516 268 MobiDBLite consensus disorder prediction 85 115 - -
Fra18g01516 268 MobiDBLite consensus disorder prediction 173 192 - -
Fra18g01516 268 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 6 261 IPR021410 -
Fra18g01516 268 MobiDBLite consensus disorder prediction 173 204 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01516 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89168 Fra11g00688 Fra18g01516
393624 Fra13g01395 Fra18g01516
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr7:54045059 Fra18g01516 Fra-Chr18:60060676 transposed
Fra Fra-Chr7:55254755 Fra18g01516 Fra-Chr18:60060676 transposed
Fra Fra-Chr11:6676780 Fra18g01516 Fra-Chr18:60060676 wgd
Fra Fra-Chr13:42201735 Fra18g01516 Fra-Chr18:60060676 wgd