Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra18g01563 | ATGTCGAAGAATTCGTGGTGGATCGGCTTCGTGTTTGTTGTTTTATGCTTATCTTCTTCTGGGGTGTTTGCGATTGATGATTTTAATCAAGCATTTCCAATCATAGAACCCGATCCTGGTCATACAAAACTTCGTATTTCTAGTGAGGGACTGGAAGCTATCAGGAGAATAACCAATCCTATTGCAGCTGTTGCTGTGATTGGTCCATATCGTTCTGGAAAGTCATTTCTGCTTAATCAACTTCTTTCACTTTCTTGTAATGAAGGGTTTGGTGTTGGCCATATGCGTGACACTAAAACGAAAGGAATATGGGTATGGGGAACTCCAGTTGAAATGGATATTGATGGAGTGAAAACATCTGTATTTTATCTTGATACCGAGGGATTTGAAAGCATAGGGAAATCAAACGTCTATGATGACAGAATATTTGCTCTTGCTACAGTTTTGAGTTCCGTCCTTATCTACAATTTGCCTGAGACGATACGTGAAGCTGATATATCACGATTATCATTTGCTGTTGAGCTTGCTGAAGAGTTTTATGGAAGAGTCGAGGGGCAAGATGTGGCGTTTGAACCAGCAAAACTATTGTGGCTTATACAACGGGACTTTTTACAGGGAAAGTCTGTTAAAGAAATGGTTGATGAAGCTTTACGACGTGTTCCTAACTCTGATGGTGACAAAAATATTGATCAGGTCAACCAGATTCGAGACTCCCTGGCTATTATGGGTGACAATAGCACAGCTTTCAGCTTACCACAACCACATCTCCAAAGGACAAAACTTTGTGACTTGAAAGACGAGGAGCTTGATCCAAGTTATGTTTCAAAGAGAGAACAGTTGAAAGAAGTTGTTAAATCTGTTATCCGTCCCAAGATTGTACAGGGCAAATCACTTAACGGGAATGAGTTTGTAGCTTTTCTTGAAAAGATTTTGGAAGCTTTAAACAAGGGTGAGATTCCATCCACAGGGTCTCTTGTGGAGGTATTTAACAAGAAGATATTGGAGAGATGTTTAAAGTTATATGAGGATCGTATGACAAAAGTGATTTTACCGGTTTCTGAGGAGTCTCTACAATCCATCCATGAAGCTTCTAGAACCGAATCTTTGGAATCTTTTGATGAACAGCATTTTGGCCGTCATCATGCCAAGAAATCAGCTGAAACACTTGATGAAGATATTGAAAAGATGTTTAAGAATTTTGTGATGGCAAACCAATATCAATCTTCAAAATTGTGCGAGTCACTCTATACATCATGTGAGGATAAAATGGACCAACTTCAAGTACTCAGACTGCCTTCCATGGCCAAATTCAATGCGGGCTTTCTTCAATGCAACCAAAGTTTTGAAAAAGTGTGCGTCGGGCCTTCTAAAACCATATATGAGCAACGAATGGTGAAGATGATGGGAAAGTCAAAGTCTTTGTTTATAAAGGAATATAACCACAGATTATTTAACTGGTTGGTAGCCTTTTCACTTGTAATGGTGATTGTGGGACGTTTTATCATAAAATTCATTTTGCTTGAAATCGGGGCGTGGATAATGTTTATATTTTTGGAGACGTACACACGGATGTTTTGGTCACCTGAATCTCTTTATTACAACCCTGTTTGGCATGGCATTGTAGCAACTTGGGAAACACTTGTCTACAGCCCAATTCTTGATTTAGACAGATGGGCGATACAAATCGGATTCATTGCATCAATATTGTTAATATATTGGCGATGCTTTGCAAGAAGGAAACACGGGTCCCATTCATTGTTACCATTGTACAACAGCAGTTCAAAAGTTCGGGATAGATCAGAATAG | 1806 | 39.2 | MSKNSWWIGFVFVVLCLSSSGVFAIDDFNQAFPIIEPDPGHTKLRISSEGLEAIRRITNPIAAVAVIGPYRSGKSFLLNQLLSLSCNEGFGVGHMRDTKTKGIWVWGTPVEMDIDGVKTSVFYLDTEGFESIGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAVELAEEFYGRVEGQDVAFEPAKLLWLIQRDFLQGKSVKEMVDEALRRVPNSDGDKNIDQVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDEELDPSYVSKREQLKEVVKSVIRPKIVQGKSLNGNEFVAFLEKILEALNKGEIPSTGSLVEVFNKKILERCLKLYEDRMTKVILPVSEESLQSIHEASRTESLESFDEQHFGRHHAKKSAETLDEDIEKMFKNFVMANQYQSSKLCESLYTSCEDKMDQLQVLRLPSMAKFNAGFLQCNQSFEKVCVGPSKTIYEQRMVKMMGKSKSLFIKEYNHRLFNWLVAFSLVMVIVGRFIIKFILLEIGAWIMFIFLETYTRMFWSPESLYYNPVWHGIVATWETLVYSPILDLDRWAIQIGFIASILLIYWRCFARRKHGSHSLLPLYNSSSKVRDRSE | 601 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra18g01563 | 601 | PANTHER | GUANYLATE BINDING PROTEIN | 31 | 552 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Fra18g01563 | 601 | Gene3D | - | 26 | 294 | IPR027417 | - | |
| Fra18g01563 | 601 | FunFam | Guanylate-binding family protein | 295 | 427 | - | - | |
| Fra18g01563 | 601 | CDD | GBP | 55 | 284 | - | - | |
| Fra18g01563 | 601 | FunFam | Guanylate-binding family protein | 26 | 294 | - | - | |
| Fra18g01563 | 601 | Pfam | Guanylate-binding protein, C-terminal domain | 295 | 424 | IPR003191 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Fra18g01563 | 601 | Pfam | Guanylate-binding protein, N-terminal domain | 43 | 281 | IPR015894 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Fra18g01563 | 601 | SUPERFAMILY | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 294 | 515 | IPR036543 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Fra18g01563 | 601 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 29 | 291 | IPR027417 | - | |
| Fra18g01563 | 601 | ProSiteProfiles | GB1-RHD3-type guanine nucleotide-binding (G) domain profile. | 58 | 178 | IPR030386 | GO:0005525(InterPro) | |
| Fra18g01563 | 601 | Gene3D | - | 295 | 429 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra18g01563 | - | - |