Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra18g01576 | ATGGCTGCCACAAATGAATTTATGCATCATTTATCTATGGCTGCCTGCGAATGGTTCTTGATGTTTCTGATGTACATTGATGCTGCATTGGGCTTTATCCTCACAAGATTTGCTCATCAATGTGAATTGCAAACCCCTTGCTTGTTTTGCTTCCGGTTTGATCATGTTTTTGGCGATAAACCCGATTATTATTTGAGTCACTTCTGCAATAATCATCGCGCTGAGGTTTCTTCTTTGGTATCTTGTAATCTTCATCATAAGCTCTCTGATGTAAGAGAAATGTGTGATGATTGTTTCATGTCAACGATGAAGCAAAAACAAGGGTACCCAAAACCTTTGTTGAATAGGAATCTTGTTCGTGCACCTTCAAGTACTGGGTCATGCTCGTGTTGTAAGAGACAGTGGAAACCAAAACCAAGAAGTAAGATCAAATTAGGGGTTCCCAAAGTAACTAGGCAACCTCCATTGCCACTAATTGCAGGTCGGGCCTGTGGTCGTTATCGCCGCCGGAATTATTTCAAAAAGGCTCGGGATAAGATTTCAGGAACCACGACTCCTTGCCATGTTGGAAATAATATCCATGTGGACGTTGACATGGACGCCTTATCTGATTCGGGTTGTGCTGACCTTAAGTTCAATTCGTGTTCAGATGCTGAATCTGGAGATTCGTTTTATGAGATTGAATGTGAAAATGAGGGCTTTGAAGATGATTCTTGTGTTATTATACGTCAAGTGGAACATTTCAAGAGTTTCTCTAATCTTGAGCCTTTTAAGAGTTTTTCTAATCTTGAGCCTTCACTACCGAATGGTACCCATAACGAGAGTGTAGTGAGTCCTCTGTCTTTTACATCCAATGGTTCAATGGGGCATGCTGTAAAAGAAAACGGGTCTCTAAAAGTTAGTACTGAAACAAGTTCATTCAATCAAGATTTGCCTTCCCCTAATGATCATGAAGGCTATGAATCTCCGAGCACGCATAGTGTAGGTGAAATCAAGGGTGAAAGTGACATGGAAAAGCTAAAACGACAGATGGAATATGATCAAGAACAGATTCGTGAATTAAGCAAGGAATTAGAGGAAGAAAGAACCGCGGCTGCTATAGCTGCTGAGGCACCTAGTTCTCCAGATAAACATGAAGGCTTTGATTCTCCAAGCACAGACAGTGTGGGTGATATCAAGGGTGAAAATGAAATGGAAAAGCTAAAACGACAGATGGAATATGATCATGAACAACTGCGTTTATTGCACAAGGAGTTAGAGGAAGAAAGAAACGCTGCTGCAATAGCTGCTGACGAGGCAATGGCCATGATTACAAGATTGCAAGAAGAAAAATCTGCTTTACATATGGAAGCGTTGCAGTATTTAAGAATGATGGATGAACAAGCAGAATATGATATGGAAGCTTTAGATAAGGCCAATGATCTTGTTACTGAGAAAGATAAAGAAATTCAAGATTTAGAAGCCGAGCTGGAATATTTCAGAAGCCGATACGAGGATGAATCGATCAATGGGAATGCTACAGTTAATTTCAAAGAAAATCATATGGGAAATGGGAAAATTGATTCTATATCTTCTTCTGGCTCAAAATCTATGAATACGTTAGAATCGAGGGCTAATAATCATGCGCTTTTAGACCTTGAAGATGAAAAGAAATACATTTTAAACTCTATATCAGAGTTGGAAAGGAAAGGTCACCAAATTTCTGATGGTAATAATGGTTTGTCACAACAAAATGAAACTCATACGGGTACCCTTGAGAATGAAATTTCAGATCTTAATGAATGGTTAGAAGCAGTTGAATCTGATCGGGATTTTCTTGAGCATGCTTGTAACACGGTCCAGAGTCACGTGGGAGTAGAGTTTATTCAAAAAATAGCTCAGCACTTGCATGATATGAGAAGGGTTAGGTTTGATAGAAGATGCCAAACTGTTGGTTGA | 1938 | 39.53 | MAATNEFMHHLSMAACEWFLMFLMYIDAALGFILTRFAHQCELQTPCLFCFRFDHVFGDKPDYYLSHFCNNHRAEVSSLVSCNLHHKLSDVREMCDDCFMSTMKQKQGYPKPLLNRNLVRAPSSTGSCSCCKRQWKPKPRSKIKLGVPKVTRQPPLPLIAGRACGRYRRRNYFKKARDKISGTTTPCHVGNNIHVDVDMDALSDSGCADLKFNSCSDAESGDSFYEIECENEGFEDDSCVIIRQVEHFKSFSNLEPFKSFSNLEPSLPNGTHNESVVSPLSFTSNGSMGHAVKENGSLKVSTETSSFNQDLPSPNDHEGYESPSTHSVGEIKGESDMEKLKRQMEYDQEQIRELSKELEEERTAAAIAAEAPSSPDKHEGFDSPSTDSVGDIKGENEMEKLKRQMEYDHEQLRLLHKELEEERNAAAIAADEAMAMITRLQEEKSALHMEALQYLRMMDEQAEYDMEALDKANDLVTEKDKEIQDLEAELEYFRSRYEDESINGNATVNFKENHMGNGKIDSISSSGSKSMNTLESRANNHALLDLEDEKKYILNSISELERKGHQISDGNNGLSQQNETHTGTLENEISDLNEWLEAVESDRDFLEHACNTVQSHVGVEFIQKIAQHLHDMRRVRFDRRCQTVG | 645 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra18g01576 | 645 | MobiDBLite | consensus disorder prediction | 287 | 322 | - | - | |
| Fra18g01576 | 645 | Coils | Coil | 543 | 563 | - | - | |
| Fra18g01576 | 645 | PANTHER | MYOSIN-BINDING PROTEIN 2 | 302 | 369 | IPR039306 | GO:0017022(InterPro) | |
| Fra18g01576 | 645 | MobiDBLite | consensus disorder prediction | 368 | 392 | - | - | |
| Fra18g01576 | 645 | MobiDBLite | consensus disorder prediction | 287 | 335 | - | - | |
| Fra18g01576 | 645 | Coils | Coil | 337 | 371 | - | - | |
| Fra18g01576 | 645 | ProSiteProfiles | GTD-binding domain profile. | 396 | 494 | IPR007656 | - | |
| Fra18g01576 | 645 | Coils | Coil | 402 | 450 | - | - | |
| Fra18g01576 | 645 | Coils | Coil | 469 | 503 | - | - | |
| Fra18g01576 | 645 | Pfam | Zein-binding | 400 | 490 | IPR007656 | - | |
| Fra18g01576 | 645 | Pfam | Zein-binding | 339 | 370 | IPR007656 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra18g01576 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 90881 | Fra18g01576 | Fra1g00664 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr10:56527624 | Fra18g01576 | Fra-Chr18:61147172 | dispersed | |
| Fra | Fra-Chr11:5621383 | Fra18g01576 | Fra-Chr18:61147172 | dispersed | |
| Fra | Fra-Chr18:61147172 | Fra7g03075 | Fra-Chr7:88154493 | dispersed | |
| Fra | Fra-Chr1:63440750 | Fra18g01576 | Fra-Chr18:61147172 | wgd |