Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra18g01585 | ATGGCGAGCACATGTGAAGGAAAGAGTTCATGGCCCGAGCTTATAGGCACGAGGGGAGACGCAGCGGCTGTTACAATTGAAAGAGAGAATCCACGGGTCGATGCTATTATCGTCTTGGAGGGTACGGATGTGCCATTTGATTTCCGATGCGACCGTGTGTGGGTGTGGGTGAACGCTAATGGGGTGGTCGTTAGCCGTCCTTCCATTGGCTAA | 213 | 53.05 | MASTCEGKSSWPELIGTRGDAAAVTIERENPRVDAIIVLEGTDVPFDFRCDRVWVWVNANGVVVSRPSIG | 70 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra18g01585 | 70 | ProSitePatterns | Potato inhibitor I family signature. | 11 | 22 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fra18g01585 | 70 | PRINTS | Potato inhibitor I signature | 47 | 57 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fra18g01585 | 70 | PRINTS | Potato inhibitor I signature | 10 | 23 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fra18g01585 | 70 | PRINTS | Potato inhibitor I signature | 35 | 46 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fra18g01585 | 70 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 4 | 70 | IPR036354 | - | |
| Fra18g01585 | 70 | Gene3D | Trypsin Inhibitor V, subunit A | 1 | 69 | - | - | |
| Fra18g01585 | 70 | Pfam | Potato inhibitor I family | 8 | 70 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fra18g01585 | 70 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 4 | 70 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra18g01585 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr18:61259527 | Fra18g01587 | Fra-Chr18:61271665 | dispersed | |
| Fra | Fra-Chr18:61253963 | Fra18g01585 | Fra-Chr18:61259527 | tandem | |
| Fra | Fra-Chr18:61259527 | Fra18g01586 | Fra-Chr18:61263827 | tandem |