AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01643 ATGGAGGTGAAGAGCAAGTTATCAGCACAGTGGTGGTGGTTTGACAGTCAGAGCAACAGCATCCCAAGGAAATCTCCATGGCTACACTCTACTCTTGCAGAACTGGATGAGAAGACAGAGGCAATGCTTAAACTAATCGAGGAAGATGCAGATTCATTCGCAAAGCGTGCAGAAATGTATTACAAGAAACGACCCGAGCTTATCACCATAGTTGAGGATCTCTACAGGGCTCATCGCTCGTTAGCAGAAAAATATGATCAAGTCAAATTTGATGGCGGTAATCGCCACTTGACTCCATGGTCATCTTGCCCTTTACCCTTGTCCAAATACCGAACTTCTCAACTAGCAAAAGAATCAGAGAAATCATATGACAGTTACTCCGAGTCCTTTGACTTTGACCATGACTATTATGATTCTGATGACTCTGTGGTGGTTGATGATCTTGAACTACAACAACAAAAACAACAAGAGGAAGAAGATGGAAGTACCCAATTCGACGAAGAAATCAAGCAAGTTAAGAATTCAGATGAAGAAATAGAGCGTTTGAGGGAAGAAATCGATGAACTGAGACGTGAAAACAAGATTCAGAAAGATCAATTGATGCAGAAAGATGAAGAGAAGAAAGAGGCAATAAGACAACTCAGTTTTTGTGTGGATTATCTCAAGCAAGAAAATTTAGATCTGAAAACAAGAATTGCTAAAGATTCTTTCAATAAGCAAAACAGCAACATCAGCAGCAGAAGCCCATTTGAGTTCACCAAACTAAAAGGGGTATTTTGGGGAATGTTTTCTAATGGTGAAGCTGCTGCTGTCCCTTTATAG 822 40.39 MEVKSKLSAQWWWFDSQSNSIPRKSPWLHSTLAELDEKTEAMLKLIEEDADSFAKRAEMYYKKRPELITIVEDLYRAHRSLAEKYDQVKFDGGNRHLTPWSSCPLPLSKYRTSQLAKESEKSYDSYSESFDFDHDYYDSDDSVVVDDLELQQQKQQEEEDGSTQFDEEIKQVKNSDEEIERLREEIDELRRENKIQKDQLMQKDEEKKEAIRQLSFCVDYLKQENLDLKTRIAKDSFNKQNSNISSRSPFEFTKLKGVFWGMFSNGEAAAVPL 273
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01643 273 Coils Coil 165 213 - -
Fra18g01643 273 Pfam KIP1-like protein 11 86 IPR011684 GO:0003779(InterPro)
Fra18g01643 273 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 92 IPR011684 GO:0003779(InterPro)
Fra18g01643 273 PANTHER PROTEIN NETWORKED 4A 9 188 IPR051861 GO:0005774(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01643 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
90708 Fra17g00830 Fra18g01643
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr18:63461360 Fra4g01208 Fra-Chr4:51060900 dispersed
Fra Fra-Chr17:26609186 Fra18g01643 Fra-Chr18:63461360 wgd