AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01706 ATGAATCGGAATTCTTCTAAGGACTCATTGATCGCTACACGAGGTCGAAATCTCAACGTTAACGGTGTTTATAATGCTCCGGTGACCGGATTATTATCTCACCGGCGAGTTAGGAGTTTCACCACCACCACCACCACAACCGAAGATTTTGGCAACAATAACAGCAGCAACTTAGATCTATCGTCACGTAATCGTCGTACGCTCTCCGTCGCACCTTCCGATGAATCCGACTTGCAGGTGAGGATGGAAAAGCTTTCGACTGGATCAACAATGCCTGCAAAAAGCGTATTAGATGATCTACTTTCATCTAATGAAGGGGGAAAGCATGATTATGACTGGCTCTTGACTCCTCCAGAAACTCATGTACTTCCATCTTCAAATGGAAATGAATCTCAACCAAAATCAGTTGCCCCAAAAAGAATGTCTTCAGTTAGATCAGGCTCTACAAATAGAACCTCAAGGCTTTCTGTTTCTCAATCCGAGCGTAACCATCCTTCAAGACCAGCAAGAAGCAGTTCAGTGACTCGCCCGTCAATCACTACCACCCAAAACACAAACAGAAACTCTAATATTTTAAACACCAGCTCTGCTTCTGTCTCTTCTTACAAAAGACCATCCACCCCGACTAACCGTCTACCATCAGCCTCCAGACCCTCCACCACTTCTTCCCGTACAACACCTTCTAGAAGCCGTCCATCCTCCACCACGACGACTTACACTGACAAAACCATTAGACCATCAACTCCTACTCCACGTCCCCAGTCACCTACTGTTCGACCAGCTTCTAGGCCATCAACTCCAACTCGTAGGAACCCAACACCTTCTAGTACTACTGCTCCATCTTTTAATAACCGAAGCGTGGGACCCACGTCTAGATCAAACTCTTCTGTCTCACGGGTCAGACCCATCAATCTTCCTGATTTTCCAAATGAAACACCACCAAATCTCAAAACAAGTGTGCCAGAAAGGCCTATGTCTGCTGGTAGGTCCAGGCGAGGTGCAGCCATGACTGTGAAGGGAAATGTAGAGAATACAAACACAAAAGGACAGTCGTCGCCCATTGTCACTAGGGGTACACTTGCAGCACCACCTGGAAGGGGGCGGTCACACGCTAACGGGCATATGGTTGAACCAGTTACAAGAAAACCTATAAAGGTGTTAAATTCAGATCCTGGTGCAGAGTTTGGGAGGAGCATCTCAAAGAAATCACTTGACATGGCCATAAAACATATGGATATAAGAACAAGAGGCACGCGCCCACTCTCCGGGTCAACGCTCTTTCCTCAAAGCATTCGATCGAGTAATGGTTCAAGTGCAAGGGACAATATTAACTACAAAAGTGGAACTTTTAAAAACGGTTATTCGGAGAACAAAGTGAAACCTGTGACCATGGAAGATAAAAGTGCATATTCTTCTAAACTAGCACGTGTAGATGTTTGCGAGAGCTTGAGGTACGACGCGATTTTACTGAAGGAAGATCTGAAGAACACAAGTTGGTTGCATAGTGAAGATGAGAATAGTGATCAAAGTCTATTGTTTGATAATGGATTTGAGCCACTCCCCGAACCTTTTGCACCCTTGTGA 1584 45.39 MNRNSSKDSLIATRGRNLNVNGVYNAPVTGLLSHRRVRSFTTTTTTTEDFGNNNSSNLDLSSRNRRTLSVAPSDESDLQVRMEKLSTGSTMPAKSVLDDLLSSNEGGKHDYDWLLTPPETHVLPSSNGNESQPKSVAPKRMSSVRSGSTNRTSRLSVSQSERNHPSRPARSSSVTRPSITTTQNTNRNSNILNTSSASVSSYKRPSTPTNRLPSASRPSTTSSRTTPSRSRPSSTTTTYTDKTIRPSTPTPRPQSPTVRPASRPSTPTRRNPTPSSTTAPSFNNRSVGPTSRSNSSVSRVRPINLPDFPNETPPNLKTSVPERPMSAGRSRRGAAMTVKGNVENTNTKGQSSPIVTRGTLAAPPGRGRSHANGHMVEPVTRKPIKVLNSDPGAEFGRSISKKSLDMAIKHMDIRTRGTRPLSGSTLFPQSIRSSNGSSARDNINYKSGTFKNGYSENKVKPVTMEDKSAYSSKLARVDVCESLRYDAILLKEDLKNTSWLHSEDENSDQSLLFDNGFEPLPEPFAPL 527
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01706 527 MobiDBLite consensus disorder prediction 505 527 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 417 443 - -
Fra18g01706 527 PANTHER GASTRIC MUCIN-LIKE PROTEIN 51 509 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Fra18g01706 527 MobiDBLite consensus disorder prediction 261 301 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 343 357 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 343 373 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 111 331 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 43 64 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 120 248 - -
Fra18g01706 527 MobiDBLite consensus disorder prediction 418 443 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01706 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
90724 Fra17g00928 Fra18g01706
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2443929 Fra Fra18g01706 Fra-Chr18:65030148 Fra1g01258 Fra-Chr1:73410022
2468900 Fra Fra1g00793 Fra-Chr1:65867539 Fra18g01706 Fra-Chr18:65030148
2498960 Fra Fra17g00928 Fra-Chr17:27540800 Fra18g01706 Fra-Chr18:65030148