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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01714 ATGCATATGAGTCTTCAATTTCGAAGTCCAGTGAAGCTTGTTCTGGTTATTTGCTTCTTCTGGTGGCCAATTGTTGGATCTCAAATATCTAATCCTCTACCAAAGCCTGCGAGGGCTCTTGATGCGACCTTACAGGACTATGCGTATCGCGCATTTATTCGTCCACGTACTGGTATTCCCTTTGATGGTATTGTCCCTCCGTATTTGACTGGGATTAAGATATCAGCAATGAGGCTCAGAAGTGGTAGTCTGTATCGTAGAGGCGTTCAAAACTATAAAGAATTCGTAATTCCGGTTGGCATAAGAGAGCAACCGTATGTGGAGAGACTGGTTCTGGTCTATCAAAACTTAGGAAATTGGTCCACAACTTATTACTCTTTACCTGGTTACATTTATCTAGCTCCCGTATTAGGTCTTCTTGCTTATAATGGTTCAGATTTGTCAGCTTCTAACCTACCAGAACTCGACTTGTGGGCTTCTGAGGAAGCCATTACAATACATTTTGGAAGAATGCGCCCAGTACCAGTTGGGTTGGTTGCAAAGTGTGCTTGGTTTGATCTAAATGGTCAGGTGAATTTCACAAATTTGTTATCTGGGAATGTATGTTCAACCACTGAACAGGGGCATTTCTCCATTGTAGCTGAATCAGCTGTCCCTCCTGTTCCAGTACCTCCTGCACCACCTCAACCTGCACCATCAAAACCTACACCTAGTAGTAGAAAGAATAACGAGGCTAGGATTTGGGGTATTATTGGTTCAGTAACTGGTGGAACCGCGTTGCTGGTGTTATTGGTGTTGTTTATATTGTGGGCGTGGCGGTACAAAAAGAGGAAGAGAATGCGTGAATTAGAAAGGGCTGCAGATGCTGGTGTAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGAATTTTGAAAGCGACTTAGATGCTTGA 966 43.79 MHMSLQFRSPVKLVLVICFFWWPIVGSQISNPLPKPARALDATLQDYAYRAFIRPRTGIPFDGIVPPYLTGIKISAMRLRSGSLYRRGVQNYKEFVIPVGIREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGSDLSASNLPELDLWASEEAITIHFGRMRPVPVGLVAKCAWFDLNGQVNFTNLLSGNVCSTTEQGHFSIVAESAVPPVPVPPAPPQPAPSKPTPSSRKNNEARIWGIIGSVTGGTALLVLLVLFILWAWRYKKRKRMRELERAADAGVALRMTRIGSMRAPFALATRTMPNFESDLDA 321
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01714 321 MobiDBLite consensus disorder prediction 221 235 - -
Fra18g01714 321 Pfam Protein of unknown function (DUF1191) 36 214 IPR010605 -
Fra18g01714 321 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 14 319 IPR010605 GO:0016020(PANTHER)
Fra18g01714 321 MobiDBLite consensus disorder prediction 221 241 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01714 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
90723 Fra17g00925 Fra18g01714
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2441858 Fra Fra17g00600 Fra-Chr17:23781193 Fra18g01714 Fra-Chr18:65156047
2443935 Fra Fra18g01714 Fra-Chr18:65156047 Fra8g00543 Fra-Chr8:4624601
2462355 Fra Fra2g00028 Fra-Chr2:816176 Fra18g01714 Fra-Chr18:65156047
2498959 Fra Fra17g00925 Fra-Chr17:27501121 Fra18g01714 Fra-Chr18:65156047