AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01718 ATGGACATCGAGAAGAAAGACGAACAACCTCTCAGATCCACCACCACCACCGCCTCCGCCCCCGCCGCCGTCGCCGGCGACTCCTCCGGCAACCGCCACCGCCGGCGACGCATCATCATCTGCTCATCGCTCATCGGAGTCACACTCACCATCGCCTTAATCATACTCATTCTAGCCCTCACCGTCTTCAAACCTAAAAAGCCCGTTCTAACAGTCGATTCCGTATCGATTCAAGACCTTGATGTTTCCGTCAATCCGATTCCGATTCAGGTGTCGTTGAACCTCTCGCTTGCTCTCGGAATCACGATCGAGAATCGGAATAAGGTGAGTATCAGTTACAAGAGTAGCTCGTCGGCGTTACGTTACAGAGGTAAGGAGATCGGTAGCGTTCCGATTCCGGCCGGAAAACTTGGGGCTGATGATCGGACGGAGTTGAATCTGACGCTTACGGTGTTTGCTGATCGGTTGGTGTCTGATTCGGAGATCTATGGGGATGTTCTTAGAGGTAATTTGCCGATTTCTACTTATACGAGAATCAAAGCGAAAGTTCGTGTGCTGTTCTTTCATATTCATGTTACGTCTACTTCGACTTGTGATGTGAATATTGATGTGCAGTCTAGACGTGTTGCGAATCAAACGTGCCAGTATAAGAACAAAATTTAG 663 49.47 MDIEKKDEQPLRSTTTTASAPAAVAGDSSGNRHRRRRIIICSSLIGVTLTIALIILILALTVFKPKKPVLTVDSVSIQDLDVSVNPIPIQVSLNLSLALGITIENRNKVSISYKSSSSALRYRGKEIGSVPIPAGKLGADDRTELNLTLTVFADRLVSDSEIYGDVLRGNLPISTYTRIKAKVRVLFFHIHVTSTSTCDVNIDVQSRRVANQTCQYKNKI 220
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01718 220 MobiDBLite consensus disorder prediction 1 29 - -
Fra18g01718 220 Gene3D - 56 203 - -
Fra18g01718 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 214 - -
Fra18g01718 220 SUPERFAMILY LEA14-like 53 159 - -
Fra18g01718 220 Pfam Late embryogenesis abundant protein 101 196 IPR004864 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01718 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
90720 Fra17g00920 Fra18g01718
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2498956 Fra Fra17g00920 Fra-Chr17:27453051 Fra18g01718 Fra-Chr18:65200967