Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra18g01728 | ATGACATTTAAGAGTAAAGTGCAAAGGATTGTAGTTTATGGTTGGAGAAAGAATGGCTTATTGTTGTCTTCCTCAAGGACTATAAATACCTTTGCAACTGGTTTGGATAATCGAATCTTGAAGTCACCTTCTCTTGTTTCTCTTGACCTCCCTGATGTGTGGGATTCTAGCTCTACCAATTATAGTGAATCATCTACCCAAAAATTTGCTAGTGAGCACACTGCTAGAGTAATTGATGGAAAACAAGTTGCCGAGGAAATCATATCAAAGGTAGCAACTGAAGTAACAAGAATGAAGAAAACAATTGGTGAGGTTCCGGGACTGGGTGTAATTTTAGTAGGCAAGAGAAAAGATTCCCTAACATATGTTCATAACAAGATAAAAGCTTGTGAAGAAGCAGGAATCAAGTTTAAACTGACCGAGTTTTCAGATAATTGTACCGAAGATGAAGTTTGTGATGCTATAATGCAGTTCAATGTAGATCCATCTTTTCATGGTATCCTTGTCCAGCTTCCTCTTCCTCAGCATCTAAATGAAGAGAAGATTTTGAATGTATTGAAATTGGAAAAAGATGTAGATGGTTTTCATCCAATGAATATGGGAAACCTAGCTATGAGGGGAAGGGAACCGTTGTTTATCCCCTGCACGCCAAAAGGTTGTGTCGAGTTATTAATCAGATATGGTGTGGATATTATGGGTAAGAAAGCTGTTGTTATTGGAAGAAGCAACATTGTTGGTTTACCCGCTTCCTTGTTGTTGCAGAGGCACCATGCAACAGTTACCATTGTGACAGCATTCACAGCAAACCCTGAAGAAATCACACGTGAAGCTGATATTTTGATAAGTGGCGTAGGAGTCCCTAATATGGTTCGTGGAAGCTGGGTGAAGCCTGGTGCTGTGGTGGTTGATGTTGGAACTCATCCGATTGAGGACTCAAGTTGTGAGCAAGGGTATCGGCTGATGGGAGATGTATGTTACGAGGAAGCATCAAGGGTAGCTTCTTTGATCACCCCTGTTCCGGGAGGAGTGGGGCCCATGACTGTTGCAATGCTGCTGTGCAATACGCTTGAATCTGCTACGCGTAAGTACAATTTTGTTTAA | 1101 | 41.24 | MTFKSKVQRIVVYGWRKNGLLLSSSRTINTFATGLDNRILKSPSLVSLDLPDVWDSSSTNYSESSTQKFASEHTARVIDGKQVAEEIISKVATEVTRMKKTIGEVPGLGVILVGKRKDSLTYVHNKIKACEEAGIKFKLTEFSDNCTEDEVCDAIMQFNVDPSFHGILVQLPLPQHLNEEKILNVLKLEKDVDGFHPMNMGNLAMRGREPLFIPCTPKGCVELLIRYGVDIMGKKAVVIGRSNIVGLPASLLLQRHHATVTIVTAFTANPEEITREADILISGVGVPNMVRGSWVKPGAVVVDVGTHPIEDSSCEQGYRLMGDVCYEEASRVASLITPVPGGVGPMTVAMLLCNTLESATRKYNFV | 366 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 336 | 354 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 147 | 174 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 182 | 203 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 106 | 128 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 319 | 335 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 229 | 249 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 278 | 307 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 195 | 361 | IPR036291 | - | |
| Fra18g01728 | 366 | FunFam | C-1-tetrahydrofolate synthase, cytoplasmic, putative | 80 | 220 | - | - | |
| Fra18g01728 | 366 | Pfam | Tetrahydrofolate dehydrogenase-cyclohydrolase, catalytic domain | 78 | 193 | IPR020630 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | CDD | NAD-bind-m-THF-DH-Cyclohyd | 189 | 359 | IPR020631 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | Hamap | Bifunctional protein FolD [folD]. | 75 | 363 | IPR000672 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | Pfam | Tetrahydrofolate dehydrogenase-cyclohydrolase, NAD(P)-binding domain | 196 | 362 | IPR020631 | GO:0004488(InterPro) | |
| Fra18g01728 | 366 | PANTHER | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED | 74 | 364 | - | GO:0004477(PANTHER)|GO:0004488(PANTHER)|GO:0005829(PANTHER)|GO:0035999(PANTHER) | |
| Fra18g01728 | 366 | ProSitePatterns | Tetrahydrofolate dehydrogenase-cyclohydrolase signature 2. | 340 | 348 | IPR020867 | GO:0003824(InterPro) | |
| Fra18g01728 | 366 | SUPERFAMILY | Aminoacid dehydrogenase-like, N-terminal domain | 75 | 194 | IPR046346 | - | |
| Fra18g01728 | 366 | Gene3D | Leucine Dehydrogenase, chain A, domain 1 | 80 | 357 | - | - | |
| Fra18g01728 | 366 | Gene3D | - | 78 | 339 | - | - | |
| Fra18g01728 | 366 | FunFam | Bifunctional protein FolD | 212 | 339 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra18g01728 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2431511 | Fra | Fra10g01479 | Fra-Chr10:55802195 | Fra18g01728 | Fra-Chr18:65342386 | |
| 2442026 | Fra | Fra17g00851 | Fra-Chr17:26819865 | Fra18g01728 | Fra-Chr18:65342386 | |
| 2461966 | Fra | Fra18g01728 | Fra-Chr18:65342386 | Fra11g00216 | Fra-Chr11:2120677 |