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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01745 ATGGACGGAGGCTACAGCCGCCCCACCACCTTCCACCACCAAACCGACCGGCGGCTGGAGATCGTCAGCGGCAAGGGGAACCAAATCTACGCCGCCGTGGGCGGTGGTCGGTCGCCGGAGTTCCCGCCGAGAACGTCGACGTCGTCAACGAAGCCGTGGGGAGGGTTCGGTGATCCGGAGAGCAAGAGGAAGAAGAGGATTGCGAAGTATAAGGTGTATACGATTGAAGGGAGGGTGAAGGCTTCGTTTAGAAAGGGGATTCGGTGGATCAAATCAAAGTGCTCTGATTTCATCCATGGGATTTGA 306 57.52 MDGGYSRPTTFHHQTDRRLEIVSGKGNQIYAAVGGGRSPEFPPRTSTSSTKPWGGFGDPESKRKKRIAKYKVYTIEGRVKASFRKGIRWIKSKCSDFIHGI 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01745 101 MobiDBLite consensus disorder prediction 32 61 - -
Fra18g01745 101 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 43 100 - -
Fra18g01745 101 Pfam Domain of unknown function (DUF3511) 56 100 IPR021899 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01745 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2438034 Fra Fra14g00890 Fra-Chr14:38884281 Fra18g01745 Fra-Chr18:65801909
2439804 Fra Fra15g01529 Fra-Chr15:50740632 Fra18g01745 Fra-Chr18:65801909
2443957 Fra Fra18g01745 Fra-Chr18:65801909 Fra6g01440 Fra-Chr6:64054507
2461971 Fra Fra18g01745 Fra-Chr18:65801909 Fra14g00606 Fra-Chr14:35458114