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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra18g01765 ATGTCTCCTCTGCAAACCCTAATCTTCATCTTCCTCATTTCTTCATCATCTCTTCCACTCATCTCCTCCACCACCGTCGCCGCCGCACCGACGGTGTACGAAGCCCTAGAATCGTACGATTTCCCGGCGGGTCTGCTTCCGTTGGGGGTGAAGGGCTACACTCTGGACGAACAAACGGGTGAATTCGAGGTGGACATCGGTCAAACGTGCTCGTACACCGTACAAGGGTACAATCTGAAGTACCAATCGACGATCAGCGGTGTGATTAGCAGAGATAAGTTGACGAATTTGAAGGGGGTGAGTGTGAAGGTGCTGTTCTTCTGGTTGGATATTGTGGAGGTGAGTCGCGATGGTGATCAGTTGTATCTGTCGGTTGGGGTGCTGTCGGCGGGGTTCGATATCAGTGGGTTCGTTGAGTCGCCGCAGTGTGGGTGTGGGTTCGATTGCAATGGTGTGGTGGTTCGGTGA 468 53.21 MSPLQTLIFIFLISSSSLPLISSTTVAAAPTVYEALESYDFPAGLLPLGVKGYTLDEQTGEFEVDIGQTCSYTVQGYNLKYQSTISGVISRDKLTNLKGVSVKVLFFWLDIVEVSRDGDQLYLSVGVLSAGFDISGFVESPQCGCGFDCNGVVVR 155
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra18g01765 155 Gene3D - 13 140 IPR036758 -
Fra18g01765 155 PANTHER T31J12.3 PROTEIN-RELATED 24 144 IPR007493 -
Fra18g01765 155 Pfam Protein of unknown function, DUF538 32 137 IPR007493 -
Fra18g01765 155 SUPERFAMILY At5g01610-like 7 149 IPR036758 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra18g01765 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
90715 Fra17g00868 Fra18g01765
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2477318 Fra Fra11g00633 Fra-Chr11:6180084 Fra18g01765 Fra-Chr18:66064208
2498949 Fra Fra17g00868 Fra-Chr17:26958449 Fra18g01765 Fra-Chr18:66064208
2501006 Fra Fra18g01476 Fra-Chr18:58724468 Fra18g01765 Fra-Chr18:66064208