AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra1g01590 | ATGTCCAACGAAAAGGAAAGAGAAACTCACGTTTACATGGCGAAACTCGCTGAACAAGCCGAGCGTTACGAAGAGATGGTTGAAAGTATGAAGAGCGTTGCAAAGCTAAATGTTGAACTAACTGTTGAAGAACGGAACCTGCTTTCAGTTGGATACAAGAATGTGATTGGTGCAAGGAGGGCATCTTGGCGTATTATGTCCTCAATTGAGCAAAAGGAGGAATCAAAAGGAAATGAAAGCAATGTTACCTTGATTAAGGGTTATTGCCGAAAGGTTGAAGACGAGCTTGCCAAAATTTGCAGTGACATTCTTGAGATTATAGATAAGCATCTCATACCCTCTTCTGGCTCAGGGGAAGCTACTGTTTTTTACCACAAGATGAAAGGTGACTACTACCGGTACCTTGCTGAATTCAAGACAGACCAAGAAAGGAAGGATGCTGCCGAACAGTCATTGAAGGGCTATGAGGCTGCTGCTGCTGCTGCAAACACGGAGCTCCCTTCAACCCACCCAATTCGTCTTGGTTTGGCTCTCAATTTCTCAGTGTTTTACTATGAAATTATGAACTCCCCCGAGAGGGCCTGTCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCTGACCTGGACTCCTTAAGTGAAGAATCTTACAAGGACAGCACCTTAATCATGCAACTCTTGAGAGACAACCTCACTCTTTGGACCTCTGATTTGCCTGAAGATGGAGGTGACGAAAACCATCCCAAGGGTGAAGAATCCAAACCAGCAGAACCAGAGGAGAAGAAGCAGTGA | 792 | 44.57 | MSNEKERETHVYMAKLAEQAERYEEMVESMKSVAKLNVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVTLIKGYCRKVEDELAKICSDILEIIDKHLIPSSGSGEATVFYHKMKGDYYRYLAEFKTDQERKDAAEQSLKGYEAAAAAANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENHPKGEESKPAEPEEKKQ | 263 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra1g01590 | 263 | Pfam | 14-3-3 protein | 13 | 235 | IPR023410 | - | |
| Fra1g01590 | 263 | Gene3D | - | 1 | 247 | IPR036815 | - | |
| Fra1g01590 | 263 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
| Fra1g01590 | 263 | MobiDBLite | consensus disorder prediction | 240 | 263 | - | - | |
| Fra1g01590 | 263 | PANTHER | 14-3-3 PROTEIN | 6 | 240 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Fra1g01590 | 263 | FunFam | 14-3-3 protein epsilon | 1 | 248 | - | - | |
| Fra1g01590 | 263 | Coils | Coil | 145 | 165 | - | - | |
| Fra1g01590 | 263 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Fra1g01590 | 263 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
| Fra1g01590 | 263 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Fra1g01590 | 263 | Coils | Coil | 13 | 33 | - | - | |
| Fra1g01590 | 263 | SMART | 1433-4 | 7 | 248 | IPR023410 | - | |
| Fra1g01590 | 263 | MobiDBLite | consensus disorder prediction | 236 | 263 | - | - | |
| Fra1g01590 | 263 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra1g01590 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 393932 | Fra14g01136 | Fra1g01590 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr1:76667340 | Fra2g00930 | Fra-Chr2:60634963 | dispersed | |
| Fra | Fra-Chr1:76667340 | Fra14g01136 | Fra-Chr14:42163804 | wgd | |
| Fra | Fra-Chr1:76667340 | Fra4g01154 | Fra-Chr4:50426298 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fra1g01590 | WGDA | 6 | 267 | 14-3-3 family | AT1G26480 | 83.588 | 3.96e-163 | 451.0 | |
| Fra2g00930 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 2.48e-149 | 416.0 | |
| Fra4g01154 | ACH | 6 | 264 | 14-3-3 family | AT1G26480 | 82.625 | 1.00e-160 | 445.0 | |
| Fra7g00736 | . | 4 | 247 | 14-3-3 family | AT5G65430 | 86.885 | 1.74e-161 | 446.0 | |
| Fra7g02563 | ACH,WGDA | 1 | 257 | 14-3-3 family | AT3G02520 | 87.549 | 1.44e-166 | 459.0 | |
| Fra7g02870 | . | 1 | 257 | 14-3-3 family | AT3G02520 | 75.875 | 3.75e-137 | 384.0 | |
| Fra9g00347 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 76.834 | 4.35e-147 | 410.0 | |
| Fra10g00269 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 77.186 | 1.03e-150 | 419.0 | |
| Fra11g02491 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.046 | 3.65e-147 | 410.0 | |
| Fra12g00014 | ACH | 3 | 257 | 14-3-3 family | AT3G02520 | 87.843 | 6.32e-165 | 455.0 | |
| Fra12g01242 | ACH | 3 | 257 | 14-3-3 family | AT3G02520 | 87.843 | 5.79e-165 | 455.0 | |
| Fra12g01483 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 6.15e-164 | 452.0 | |
| Fra14g01136 | ACH,WGDA | 6 | 256 | 14-3-3 family | AT1G26480 | 85.714 | 2.35e-161 | 446.0 | |
| Fra15g00584 | ACH,WGDA | 3 | 254 | 14-3-3 family | AT3G02520 | 88.095 | 2.96e-164 | 453.0 | |
| Fra15g01461 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 85.938 | 4.59e-161 | 445.0 | |
| Fra16g00904 | . | 7 | 266 | 14-3-3 family | AT1G35160 | 86.59 | 2.67e-166 | 459.0 | |
| Fra17g00131 | . | 1 | 266 | 14-3-3 family | AT1G35160 | 82.707 | 1.32e-162 | 449.0 | |
| Fra17g00169 | . | 1 | 247 | 14-3-3 family | AT5G10450 | 84.211 | 4.78e-158 | 437.0 | |
| Fra17g00192 | . | 1 | 247 | 14-3-3 family | AT5G10450 | 82.186 | 3.57e-151 | 419.0 | |
| Fra10000147.1g00003 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 87.549 | 1.33e-166 | 459.0 | |
| Fra10000195.1g00003 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 87.549 | 1.33e-166 | 459.0 |