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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra7g01720 ATGGAAATGCAACATGACTTCGATCGACTTTTGTTTTTCGAGCATGCTCGCCGGAGTGCCGAAGAAACCTACAAGACGAACCCTCTAGATACCGTGAACTTAACCCAATGGGGAGGGGCGTTGCTTGAATTGTCGACCTTCCAGAGTGTACAGGAATCAAAATTGATGATTAAAGATGCTATGTCGAAATTGGATGAAGCATTGTCGATTGATCCTAAGAAACATGATGCTTTGTGGTGTATGGGCAATGCACAAACTTCTTATGCTTTTTTGACTCCTGATAAAGATGAAGCCAAGGGTTATTTTGATTCAGCTTATGATTACTTTCAGCAGGCTGTTACTCTGGATCCAGGGAACGAACTTTACCGCAAATCATTTGAAGTGGCTTCAAAGGCTCCTGAATTACATTCAGAGCTCCATAAACAGGGTTTAAGTCAACAAGCTATGGGACCAGGACCAGGGTCTGGGGGAGGTCCTTCAACTTCTTCAAGTGTCAAGGGACCGAAGGCACAAAAGAGCAGTGATCTGAAGTATGATATATTTGGATGGGTTATTCTTGCTGTAACTATCGTGGCATGGGTTGGATTTTCTAAAGCAAATGTACCTTCACCACCTCCGCGATAA 624 43.43 MEMQHDFDRLLFFEHARRSAEETYKTNPLDTVNLTQWGGALLELSTFQSVQESKLMIKDAMSKLDEALSIDPKKHDALWCMGNAQTSYAFLTPDKDEAKGYFDSAYDYFQQAVTLDPGNELYRKSFEVASKAPELHSELHKQGLSQQAMGPGPGSGGGPSTSSSVKGPKAQKSSDLKYDIFGWVILAVTIVAWVGFSKANVPSPPPR 207
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra7g01720 207 Gene3D Tetratricopeptide repeat domain 1 149 IPR011990 GO:0005515(InterPro)
Fra7g01720 207 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 206 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Fra7g01720 207 MobiDBLite consensus disorder prediction 156 170 - -
Fra7g01720 207 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515(InterPro)
Fra7g01720 207 MobiDBLite consensus disorder prediction 139 170 - -
Fra7g01720 207 Pfam Plant specific mitochondrial import receptor subunit TOM20 7 198 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra7g01720 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
90000 Fra13g00783 Fra7g01720
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr13:35193473 Fra7g01720 Fra-Chr7:74568262 dispersed
Fra Fra-Chr11:12885656 Fra7g01720 Fra-Chr7:74568262 wgd
Fra Fra-Chr7:74568262 Fra9g00485 Fra-Chr9:4093301 wgd