AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra7g01721 ATGCCTTCAATCCCCGAAGACCCAATTCTCGCCCCAAACCCAGATCGATTCTGCATGTTCCCAATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCCTTCTGGACCGCAGAAGAAGTCGATCTGTCACAAGATCAACGCCACTGGGAGTCGTTGACCGACGGCGAACGCCACTTCATCACCCACGTTCTCGCTTTCTTTGCGGCGTCTGATGGCATCGTGCTTGAAAACCTCGCCGGAAGGTTCATGAAAGAGGTGCAGATCGCTGAAGCTCGTGCGTTCTACGGCTTTCAGATCGCGATTGAGAACATTCACTCCGAGATGTACAGTTTGCTCCTCGAATCGTATATCAAAGACTCCGATCAGAAGAATCGGTTGTTTCGAGCGATTGAAACGATCCCGTGTGTCGAGAAGAAGGCCAATTGGGCGCTCCGGTGGATCGACGGATCGGAGACGTTCGCCGAACGGATAATAGCGTTTGCGTGTGTCGAAGGGATCTTCTTCTCCGGCAGCTTCTGCGCTATCTTCTGGCTGAAGAAACGTGGGTTGATGCCGGGGTTAACGTTCTCCAACGAATTGATTTCACGAGACGAAGGATTACACTGCGATTTCGCTTGTTTGTTGTACGGGTTGTTGAAGAACAAAGTGAGTGAAGAACGAGTGAAGGGGATCGTTGCTGATGCGGTGGAGATTGAACGAGAGTTTGTTTGTGATGCGTTACCGTGTGCTCTTGTGGGTATGAATGGTGATCTCATGAGTCAATACATCGAATTTGTTGCTGATCGATTACTGGGTGCATTGGGGTGTGGTAAGTTGTATAATGTGCAGAATCCGTTTGATTGGATGGAGCTGATTTCGTTGCAGGGGAAGACGAATTTCTTTGAGAAGAGAGTTGGTGAGTATCAGAAAGCTTCAGTGATGTCGAATTTGAATGGTAATGGTGATTCTCATGTCTTCAAGATGGATGAAGACTTCTGA 990 48.59 MPSIPEDPILAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDQRHWESLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDQKNRLFRAIETIPCVEKKANWALRWIDGSETFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKNKVSEERVKGIVADAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKLYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGDSHVFKMDEDF 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra7g01721 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491(InterPro)
Fra7g01721 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 7 329 IPR000358 GO:0009263(InterPro)
Fra7g01721 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Fra7g01721 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263(InterPro)
Fra7g01721 329 CDD RNRR2 17 291 IPR033909 GO:0009263(InterPro)
Fra7g01721 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra7g01721 K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Fra7g01721 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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Event-related genes

Select Gene_1 Gene_2 Event_name
91390 Fra7g01721 Fra7g02100
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr14:35364767 Fra7g01721 Fra-Chr7:74574227 dispersed
Fra Fra-Chr14:35365557 Fra7g01721 Fra-Chr7:74574227 dispersed
Fra Fra-Chr7:69308803 Fra7g01721 Fra-Chr7:74574227 transposed
Fra Fra-Chr7:74574227 Fra7g02100 Fra-Chr7:78598872 wgd