AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra7g01730 | ATGGAGAATCACACCCCCACCGGAAACCCTGATGATCACACCACAAAACTCCACGATGAACCCCAAATCACATCTCAAGATAATAATCTCCACCAACAGATCGATCGATTCATCTCTGCATTAACAAACGATCAACAATCGGACTCATCATCTCCACCTGAAATCTCAGAATCCGTTCAAACGTTTGCAGATCTTTTCGATGTTATGATCGTTGAACACGAATCGGGGGCCAAGAGATGGGTTCATCTTGAAGAAGATGAATCTTTACGTTTTATTGATTTTGTTGATCGAACGGCGAAGGTTATCAACTCTCTTTCGAGGTTTCATTCCGATCAACGTTACGCCGGTGCGATCAACCGGTTGAGCGGTGTTCAGCAGCGTGCGATGTCGGTGTTGGAGGTTGAATTCAAATCGATGATGGATGATTTTCAAAGCTTATGTGATGGAGATCAGAAAGATCAAACCCATGAAGCGAAAACGAAAGAGTCATCGTCTTCTTCGAGTAATGTTGATCAAGAAGCTTTACCGCCGGAGTTGCAGGCTCAATCGGAATCCCCGCCGGAGAAAGATGATCAATTCTTGGGGTATTCAGATGAGATGGTATCCCATTTGAAGAAATTAGCTAAAGGATTGATCATCGGAGGTCATGAATCGGAGTGCGGTGAATTGTATTTCTTTGCTAGAAGAAACGCCATGGAAGAACACCTGAAGCTTCATCGGTTTGAGAAATTCTCCATCGACGAAATGCAGAAGATGCAATGGGAGCCGATAGAGAAAGAGATATCATCATCTATGAAGATGTTCAGACAAATTTGTACGTCACTTTTACCCAAAGAGCAGAAGCTAGCAGACGCCATTTTCTCCGGCGAAAAAACAATCTCCGACGGTGTATTCACCCACCTAACACGAATCATCCTCTTGATCTTCTTAACATTTGCAGAGGCCGTGATGTTGACGAAACGATCGCCGGAGAAACTGTTGAACTTCCTCGACGTTTACGAGACGTTACGTGACAGCATCCCGGAGGTGGAGAAACTGATCTCCGACGAAGGGCTACACCAGCTGAAATCTTCATCTTCTTTGATCACCACCATGTTAGGAGACTCCATCATCAACATATTTGCAGACCTCGAAACCTCCATCAAATCCGACGCCTCAAAGACTCCGGTCCCCGGCGGAGCCGTACATCCGATCACCCGTTACACCATGAACTACCTGAAATCCGCCTGTGAGTACAGCGACACACTGGAGCAAATATTCCGACAACACAAAACCACCGACCCACCGGACTCCACCACCGCCTCCGGCGACCCGAATTCTCACCAACCGAATCAACCCACCAACGAATCAGCAAACGGGTCACCGTTCCAATCCCAATTAACCTCAATCATGGATCAATTAGACTCAAACCTCGAATCAAAATCAAAGCTTTACAAAGACCCATCGTTGAGCTTGATCTTCATGATGAACAACGGGCGTTACATACTGCAGAAGACCAAAGGCACTGGAGAGATGAGAACCTTGATGGGCGACCCATGGGTGAGAAAACGGTCATCGGATCTTCGAGCATACCACACGAACTACAAGCGTGAAACGTGGACGAAGCTGTTGCAGTGTTTGAGTCATGAGGGGTTGAGTGTCAACGGGAAGGTGATGAAGCCAGTGCTGAAAGAGCGATTCAAGAGCTTCAATGCGATGTTCGATGAGATCTACAGATCGCAGACGACGTGGGTGGTGAGTGATGAGCAGCTGCAGTCGGAGCTGAGGGTGTCGATATCAGCGATCGTGATTCCGGCGTATCGGTCGTTCATGGGGAGGTTCAGTCAGGTGTTTACTCCGGGGAGGCAGACGGAGAAGTATATAAAGTATCAGCCGGAGGATATTGAGACGTGTATCGAAGAGTTGTTTGATGGGAGTGCGGCTCAACTGAGTAAGAAGAGATAG | 1944 | 47.27 | MENHTPTGNPDDHTTKLHDEPQITSQDNNLHQQIDRFISALTNDQQSDSSSPPEISESVQTFADLFDVMIVEHESGAKRWVHLEEDESLRFIDFVDRTAKVINSLSRFHSDQRYAGAINRLSGVQQRAMSVLEVEFKSMMDDFQSLCDGDQKDQTHEAKTKESSSSSSNVDQEALPPELQAQSESPPEKDDQFLGYSDEMVSHLKKLAKGLIIGGHESECGELYFFARRNAMEEHLKLHRFEKFSIDEMQKMQWEPIEKEISSSMKMFRQICTSLLPKEQKLADAIFSGEKTISDGVFTHLTRIILLIFLTFAEAVMLTKRSPEKLLNFLDVYETLRDSIPEVEKLISDEGLHQLKSSSSLITTMLGDSIINIFADLETSIKSDASKTPVPGGAVHPITRYTMNYLKSACEYSDTLEQIFRQHKTTDPPDSTTASGDPNSHQPNQPTNESANGSPFQSQLTSIMDQLDSNLESKSKLYKDPSLSLIFMMNNGRYILQKTKGTGEMRTLMGDPWVRKRSSDLRAYHTNYKRETWTKLLQCLSHEGLSVNGKVMKPVLKERFKSFNAMFDEIYRSQTTWVVSDEQLQSELRVSISAIVIPAYRSFMGRFSQVFTPGRQTEKYIKYQPEDIETCIEELFDGSAAQLSKKR | 647 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 146 | 160 | - | - | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 425 | 457 | - | - | |
| Fra7g01730 | 647 | SUPERFAMILY | Cullin repeat-like | 85 | 637 | IPR016159 | - | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Fra7g01730 | 647 | Pfam | Exo70 exocyst complex subunit C-terminal | 263 | 634 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 424 | 457 | - | - | |
| Fra7g01730 | 647 | Gene3D | Exocyst complex component Exo70 | 70 | 646 | - | - | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 161 | 179 | - | - | |
| Fra7g01730 | 647 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 64 | 639 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
| Fra7g01730 | 647 | Pfam | Exocyst complex component Exo70 N-terminal | 85 | 141 | - | - | |
| Fra7g01730 | 647 | MobiDBLite | consensus disorder prediction | 145 | 193 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra7g01730 | K07195 | exocyst complex component 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fra | Fra-Chr7:74645303 | Fra7g03188 | Fra-Chr7:89236371 | dispersed | |
| Fra | Fra-Chr13:35317350 | Fra7g01730 | Fra-Chr7:74645303 | transposed | |
| Fra | Fra-Chr13:35317919 | Fra7g01730 | Fra-Chr7:74645303 | transposed | |
| Fra | Fra-Chr1:75924200 | Fra7g01730 | Fra-Chr7:74645303 | transposed | |
| Fra | Fra-Chr15:3235433 | Fra7g01730 | Fra-Chr7:74645303 | wgd | |
| Fra | Fra-Chr16:38682462 | Fra7g01730 | Fra-Chr7:74645303 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fra1g01511 | ACH | 52 | 500 | EXO70 exocyst subunit family | AT5G13150 | 33.118 | 8.70e-73 | 240.0 | |
| Fra3g00939 | . | 7 | 631 | EXO70 exocyst subunit family | AT5G52340 | 70.88 | 0.0 | 941.0 | |
| Fra5g00420 | WGDA | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 52.487 | 0.0 | 585.0 | |
| Fra6g00042 | ACH,WGDA | 26 | 633 | EXO70 exocyst subunit family | AT1G72470 | 65.008 | 0.0 | 799.0 | |
| Fra6g01377 | ACH,WGDA | 20 | 633 | EXO70 exocyst subunit family | AT1G72470 | 63.099 | 0.0 | 756.0 | |
| Fra7g00402 | . | 8 | 632 | EXO70 exocyst subunit family | AT5G03540 | 76.274 | 0.0 | 973.0 | |
| Fra7g01730 | . | 56 | 684 | EXO70 exocyst subunit family | AT5G13990 | 44.885 | 3.87e-180 | 526.0 | |
| Fra7g02299 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 47.139 | 0.0 | 575.0 | |
| Fra7g03188 | ACH,WGDA | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 56.444 | 0.0 | 723.0 | |
| Fra7g03520 | ACH | 20 | 633 | EXO70 exocyst subunit family | AT1G72470 | 66.137 | 0.0 | 821.0 | |
| Fra8g00138 | . | 12 | 657 | EXO70 exocyst subunit family | AT4G31540 | 42.161 | 5.02e-168 | 494.0 | |
| Fra8g00617 | . | 9 | 684 | EXO70 exocyst subunit family | AT4G31540 | 67.899 | 0.0 | 950.0 | |
| Fra8g01555 | . | 177 | 516 | EXO70 exocyst subunit family | AT3G14090 | 33.043 | 1.52e-47 | 170.0 | |
| Fra9g01131 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 49.094 | 0.0 | 588.0 | |
| Fra12g00679 | WGDA | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 50.943 | 0.0 | 574.0 | |
| Fra13g00794 | . | 495 | 653 | EXO70 exocyst subunit family | AT5G13150 | 70.0 | 4.76e-82 | 253.0 | |
| Fra13g00795 | ACH,WGDA | 188 | 440 | EXO70 exocyst subunit family | AT5G13150 | 43.511 | 1.18e-68 | 229.0 | |
| Fra14g00543 | ACH,WGDA | 25 | 632 | EXO70 exocyst subunit family | AT1G72470 | 62.802 | 0.0 | 754.0 | |
| Fra15g00261 | ACH,WGDA | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 57.292 | 0.0 | 726.0 | |
| Fra16g00711 | ACH | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 55.865 | 0.0 | 708.0 | |
| Fra17g00560 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 62.171 | 0.0 | 780.0 | |
| Fra18g01178 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 58.268 | 0.0 | 724.0 | |
| Fra18g01274 | . | 11 | 599 | EXO70 exocyst subunit family | AT5G59730 | 49.916 | 0.0 | 548.0 | |
| Fra10000306.1g00008 | . | 8 | 638 | EXO70 exocyst subunit family | AT5G03540 | 79.843 | 0.0 | 1009.0 |