AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra7g01734 ATGAAGTCATCATTTGGGAAGATTGGGCGCAAATTGACGATGCAGAAGAGCGATGTCAAGGAGACGAGAGATCATCAGCCTTCAGCTCATTTAGATGAGCTTGCTCAGGCTTCGAAGGATATGGAAGATATGAAGAACTGCTATGATGGCTTATTATCTGCGGCTGCTGCAACTGCGAATAGTATATATGAATTTTCGGAATCGCTAAATGAAATGGGGAACTGTTTAATGGGGAAAACTGCTGCAGCCGCTGATGCTGAAAGTGGAAACGCACTATCAACTTTGGGGAATTTGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTAGTTGTGACGATTACTAACCCAGCAGATTCTCTTCTCAGTGAGCTACTAAAAGTGGAGGAGATGAAACTTCAGTGTGATGAGAAAAGAGAGGTGTACGATCACTTGATGGCTCAACATAGAGAAAAGGGAAGACTGAAGAATGGTAAAATAGAAAGTTCAATTGCGCAAAAACTGAAAGAAGCTCAAGATGAATATGATGACGTGGCTAGACTATGTGTATTTCGGGTAAAATCACTTAAGGAAGGACAATGGCGCAGTCTTTTAACACAAGCTGCTCGCCATCATGCCGCACAGGTGAATTTCTTTCGCAAAGGACTCAAAGCTGTTGAAGCAGTTGAACCTTTTATAAGAAATGTCACAGAAAAGCATCGTATTGATTGCCAACTCAGTGGATTGCATGATCATGGTTCCCAGGAAGGTGAACCTATGAGTGGCTATGAAAGCACTAATGATGGAGGATTGAGTTTTGATTATAAACAAAAGAAACAAGGACTTGATGATGATGGCACCTCGCCAAATCCAATGGAGGTAGATGTCCCGTATTTTCAAGCTTCAAATCTAGAAGATTCACAGATAAATCAGAATAAATATAAAAGCGAGCAGCTTTTTGGTAAGCAAACTAGAGTTAGCAGTTATTCGGCCCCGCTATTCCCCGACAAAAGTAATGCACCCGGAAAGCTTAAAGAAACCCAACCCACATCGAAAGTTCACTCTTACATACTACCTCCACCCAATGTGGATACCCGGAATCCAGTTTCAAAACCCACTACATCTTCTTATTCCACCCCAGTTCAAAATCTGCAACATGATACCATATCAACGGCTGCTTTGACCTCAAAAGTCCAGTCGACAGTTAAAGATGGTAACCCTGTTAATCCATCCATCCAGTTACCCGCTCCAACTACTGGAAGATTTTCCTTCTCGCAACAGGATAACCATTACAGAACCGATGGTAGTAAGGTAGACAGACGACAATCTTACTCTGGCCCGTTACCACCAAGCAAGCAGTTCTCTTTTAAACTTGCAACTAATAGTAGCGGGCCCATTACTTCTACTGAACTTCCTCACCCACCTTCTCGGGTCCCAGTTTCTCAGCCAAATTTGTCAACTAGCGCGTCATCTCCCTCTTTATCTTCTCCTAAAATAAGCGAGCTTCATGAGCTTCCTAGGCCTCCTTCTAGTAATATAGCCTTCTCTAAACCCGTTGCTATCTCTGGTGGTTTGAACCGACATTCAGCACCCCTACTTTTGAAAAATCAAGAAATTTCGCCACCTAATAAACGCGCTATGCTAACATCGAGTTGTGCATCACCTCTTCCACTTCCACCTTCTGTTGTGAAAATCAACTCGAGTAACAGCAGAACCTGA 1707 42.59 MKSSFGKIGRKLTMQKSDVKETRDHQPSAHLDELAQASKDMEDMKNCYDGLLSAAAATANSIYEFSESLNEMGNCLMGKTAAAADAESGNALSTLGNLQLELQKIADTYRSYVVVTITNPADSLLSELLKVEEMKLQCDEKREVYDHLMAQHREKGRLKNGKIESSIAQKLKEAQDEYDDVARLCVFRVKSLKEGQWRSLLTQAARHHAAQVNFFRKGLKAVEAVEPFIRNVTEKHRIDCQLSGLHDHGSQEGEPMSGYESTNDGGLSFDYKQKKQGLDDDGTSPNPMEVDVPYFQASNLEDSQINQNKYKSEQLFGKQTRVSSYSAPLFPDKSNAPGKLKETQPTSKVHSYILPPPNVDTRNPVSKPTTSSYSTPVQNLQHDTISTAALTSKVQSTVKDGNPVNPSIQLPAPTTGRFSFSQQDNHYRTDGSKVDRRQSYSGPLPPSKQFSFKLATNSSGPITSTELPHPPSRVPVSQPNLSTSASSPSLSSPKISELHELPRPPSSNIAFSKPVAISGGLNRHSAPLLLKNQEISPPNKRAMLTSSCASPLPLPPSVVKINSSNSRT 568
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra7g01734 568 MobiDBLite consensus disorder prediction 442 466 - -
Fra7g01734 568 Gene3D Arfaptin homology (AH) domain-BAR domain 26 241 IPR027267 -
Fra7g01734 568 Coils Coil 131 151 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 396 427 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 396 508 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 244 287 - -
Fra7g01734 568 Pfam BAR domain of APPL family 30 235 IPR004148 GO:0005515(InterPro)|GO:0005737(InterPro)
Fra7g01734 568 CDD BAR 40 227 - -
Fra7g01734 568 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 560 IPR037488 -
Fra7g01734 568 SUPERFAMILY BAR-IMD domain-like 32 230 IPR027267 -
Fra7g01734 568 MobiDBLite consensus disorder prediction 540 568 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 327 376 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 476 494 - -
Fra7g01734 568 MobiDBLite consensus disorder prediction 255 269 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra7g01734 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89742 Fra12g00911 Fra7g01734
91394 Fra7g01734 Fra7g02089
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr12:11335619 Fra7g01734 Fra-Chr7:74682295 wgd
Fra Fra-Chr7:74682295 Fra7g02089 Fra-Chr7:78495925 wgd
Fra Fra-Chr7:74682295 Fra9g00459 Fra-Chr9:3588663 wgd