AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra7g01747 ATGGCGGCAGATAAGCTGAATAAGCGTTCTAAAGTAAGCAATGACATTTGTCACTCATCTTGGGAGATGCAGAAAGTGAAAAAGAAAAAATATCTTCATTATGATTCAAATACAACATCACGTATTTCTCTTGAGTGGGATGACAGGAAGGAACGTGTTGTTCCTAAGAAGGAGCAGATAAGTATTGCACACAGAGAGTTGATCCCGTTTCTTCCTTTTGCTGCACATCACAAGAATGTCCTCGGTGATGTCTTTGCAGCTCCTCCTGAGTTATTTGAGCTTAATAACTTGACTGGTGTGCTATCTTACGAGGTATGGCAAACTCATTTGTCAGTTCAAGAAAGAGAGTTTCTGGCCCAGTTTCTTCCTGAAGGATCTGAGCCGCATAATACTGTTCACGAATTGTTAGCTGGGAATAATCTCAACTTTGGAAATCCATTCTTAAAATGGGGTGCTCAAATTTGCTCAGGTGATTATCATCCTGATGCCATTCTCCGTCAAGAACAGCGTAACAAGGCTAGCAAAGTAGCATATTATTCAGAATTGCATGAATATCATACTAAAATGATAAGGAGTCTGCAACTGTGGAAAGAAAGATGGACAGTAAGCATGAATCCAGAATACTTTATGCAAAATATACCAAGGCCTAAAAGGGATTTACACAAAAGTGGATCCTCACATGAGATTGGCTTACAATATGGTTCTCAACATGAATTTTGTGCAACATCTGGTTCTTGTTCGTCGGATGCTGATGATAAATCATGCAATAGTGACAGCCCAGATCTATCAGCTAGCAACAGAGAAACTTTAGTGAGTGCTTCCAGAACAGACTTGGAGAAGAACAAATATAATAATTCATCAGGTGGGAGATTGGCAGCAAGACCTAAAAAAGGAGATACACGCAAGCTCAATATAGAGTGCGGTGATGGTGCCAAATATATGTCTTATATCAAGGTCAGCAAGGAGCAGCATGAACGAGTTAAAAGCAGTATGAAGCAGTCTAACACCAGCATCCAACAAAGGTCTCTTAATATTGTTTTAGGAAATCTTGATGGTTTTTGTGTTCGACCATATGAAGTGTTCGAGGAAGAAGAGAGACAGAAGTTGCATGACCACTGGTTGCATTTGGTAAAAAAAGATCTCCCTGTGGGCTTTGAGAATTGGGAGCGCTGGCGATCTGCCAAGTGGGAATTGACGAAGTCTTTGGAGAAAGAAATGGAAGATAAATGGAAGTCAAATGATGGTCCCGCATCGAATTTGTATAATAATCAGGATGACGAGTTCATAATTGATGATCAGGATGAAGAGCTAGAGCAGTCGAATGAAGAGCAACATGTTGATGGAGAAACAAATGAGGCAACTTTAATTGCATTAGAGGAGAACATGGAACAAAATGATATTTCAATATATCGGTCCGAAGCAGATCTTAATGCCGAGAATCATGATACTACAAACACGTCTAGTCAAGATTCTGATCAGAATCAGCATCAGCATCTGCCTCAAGTTGCCGTGCATAATAATACCCAAAATTTCTGTCCTGTGCCCAGTAACACCAACTGTGATGTTATGACCGAGTCGGCTGCTTTTCCTTCGGGTCTAGTTGATTATCCTGAAAATATAAATCATGCAGATGCTTCTGTTGGTGAACAGTTTCCTCCGCCCTCTTCTGCCAATGAAATTTGGCCACTAGCTGCTCTACCAAATGTGTACTATCATCAACCTACGTCCGTAAGCCAAGATTACCCTTCGATCAGTCAATCAAGTTTTCTCCACAGGCGATCTGACGGCGGAGATTCTTTCTTTAATCCTTATGCTAATCAAGACCGTAACGAATTACTATTGCATTCACTTTATAAAGATCCTGGGAGCTCTCATTATCTGGGAAGCAATCAGTTTTCCAGAAATTTAAATTCGTTACCGTTAGATCCAAGACTTAACATTCAACAGAACATATACACAGATGGAGCGGCCCGATTTCCAATTCCAAGGGAAGAACACCTGTTGCCACTGGATCAGGTTCAAGGTTGGCCCGGGAACAATGTTGTTAACCTTCCAATGTCAGCACCGCCCCATCAGCAGCTAAGTCAAAACTGGTTTTCTGATGACGAGGTGGCACGTGACGGGTGGTCAGGTGGTGTAGTCCCTAACCATGATTTCAGGAGTGGTGGTCACGTGGTGGATGAGAGCTTATATAGTGTTTTATCCGAGTGTAATGGGTTGCGTTCAGGTGTTCATCATGGTTCAACAGAGATTATTCAGCCTGGTAACTATGTAGAGCTGGGGCGTGAATCCGTTCTGTCTACAACTGCCAACGGTGTGCCACCTCGGCTCGCTAGAGGGCCGGGCCTTAACTACATGAGTGGCAATGAAGCTCAGTTAGGATGGATGAACTTGCCTCGCGGATTGCAGGAGAGCGGGGGGAAATCATATGCAAGGTTATGGAATGATAAAGACTTAGGATGA 2463 42.39 MAADKLNKRSKVSNDICHSSWEMQKVKKKKYLHYDSNTTSRISLEWDDRKERVVPKKEQISIAHRELIPFLPFAAHHKNVLGDVFAAPPELFELNNLTGVLSYEVWQTHLSVQEREFLAQFLPEGSEPHNTVHELLAGNNLNFGNPFLKWGAQICSGDYHPDAILRQEQRNKASKVAYYSELHEYHTKMIRSLQLWKERWTVSMNPEYFMQNIPRPKRDLHKSGSSHEIGLQYGSQHEFCATSGSCSSDADDKSCNSDSPDLSASNRETLVSASRTDLEKNKYNNSSGGRLAARPKKGDTRKLNIECGDGAKYMSYIKVSKEQHERVKSSMKQSNTSIQQRSLNIVLGNLDGFCVRPYEVFEEEERQKLHDHWLHLVKKDLPVGFENWERWRSAKWELTKSLEKEMEDKWKSNDGPASNLYNNQDDEFIIDDQDEELEQSNEEQHVDGETNEATLIALEENMEQNDISIYRSEADLNAENHDTTNTSSQDSDQNQHQHLPQVAVHNNTQNFCPVPSNTNCDVMTESAAFPSGLVDYPENINHADASVGEQFPPPSSANEIWPLAALPNVYYHQPTSVSQDYPSISQSSFLHRRSDGGDSFFNPYANQDRNELLLHSLYKDPGSSHYLGSNQFSRNLNSLPLDPRLNIQQNIYTDGAARFPIPREEHLLPLDQVQGWPGNNVVNLPMSAPPHQQLSQNWFSDDEVARDGWSGGVVPNHDFRSGGHVVDESLYSVLSECNGLRSGVHHGSTEIIQPGNYVELGRESVLSTTANGVPPRLARGPGLNYMSGNEAQLGWMNLPRGLQESGGKSYARLWNDKDLG 820
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra7g01747 820 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 88 199 IPR044867 -
Fra7g01747 820 MobiDBLite consensus disorder prediction 246 288 - -
Fra7g01747 820 MobiDBLite consensus disorder prediction 246 298 - -
Fra7g01747 820 CDD DEUBAD-NFRKB 90 196 - -
Fra7g01747 820 PANTHER NFRKB-RELATED 1 496 IPR024867 GO:0031011(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra7g01747 - -