Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02056 | ATGAACACGAAGAAGATTCGTACGCCTGCAGAAGTGGTTCAAAAGACGCGATCCCTTCTCCTTTACTCCAAGAATTCTCTTGATGCCAACTCACAGATGACAGAATTGAACTCACTTATAAGGGAATTGAAGTTGATTCTTTATGGAGATGATAACTCAGAGCCTTCTGCAGAAGCTTGTGCACAGTTGACAGTTGAGTTCTATAGAGAAGATACATTGCGTCTGCTTATTATCTTTCTACCCAAGTTGAGCCTGGAGGCCCGTAAAGATGCCACGCAAGTGGTCGCGAGCTTGCAAAGGCAACCGTTGCCATCGCGATTCGAGGGGTCAAGATATTTGGAAGCTAATCTTGATCTTCTAGACATTCTCATATCCGGGTATGAGGATCCTCAATTGGCTCTTCATTATGGTAGGATGTTGAAGGAGTGCTTACGTCATCAGATTGCCGCAAGTTACTTGTTACAACCAAGTCAACTGGAGAAATTTTTTGGTTACATACAACATCCAAGTTTTGATATTGCTGCAGATGCTGCAGATGCATTCAAGGATCTTTTGACTAGACACAAGTCTACTGTGTCTGAATCTTTGTCCAAAAACTATTGCTGGTTTTTTACTGAAATGAACGAAAAGCTACTGAAATCTGAGAATTATATCACCAGAAGACAAGCCGTCAAGCTACTTGGATGCATATTGCTTGATCGCGCGAATTCTAGCGTTATGATGCGATACGTAAGCTCTAAAGATAACCTGATAATTCTAATGAATCTTCTAAGGGATCAAAGTAGGAACATTCAGATAGATGCTTTTCATGTATTCAAGCTTTTCGTAGCAAATGAAAATAAGCCTCGTGAAATAGTGAGCATACTTGTTACAAACAGAAGCAAGATTCTTCGTTTGCTTGGCGCTTTCGGTTATACAGAAGATGAAGTGTTTGAGACAGACAAGGTTCATGTGGTTAATAAACTAGCTGTACTAGAGCTTCAAGACTAA | 990 | 40.51 | MNTKKIRTPAEVVQKTRSLLLYSKNSLDANSQMTELNSLIRELKLILYGDDNSEPSAEACAQLTVEFYREDTLRLLIIFLPKLSLEARKDATQVVASLQRQPLPSRFEGSRYLEANLDLLDILISGYEDPQLALHYGRMLKECLRHQIAASYLLQPSQLEKFFGYIQHPSFDIAADAADAFKDLLTRHKSTVSESLSKNYCWFFTEMNEKLLKSENYITRRQAVKLLGCILLDRANSSVMMRYVSSKDNLIILMNLLRDQSRNIQIDAFHVFKLFVANENKPREIVSILVTNRSKILRLLGAFGYTEDEVFETDKVHVVNKLAVLELQD | 329 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02056 | 329 | Pfam | Mo25-like | 4 | 325 | IPR013878 | - | |
| Fro12g02056 | 329 | PANTHER | CALCIUM-BINDING PROTEIN 39-RELATED | 4 | 326 | IPR013878 | GO:0035556(PANTHER)|GO:0043539(PANTHER) | |
| Fro12g02056 | 329 | Gene3D | - | 5 | 326 | IPR011989 | - | |
| Fro12g02056 | 329 | SUPERFAMILY | ARM repeat | 7 | 322 | IPR016024 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02056 | K08272 | calcium binding protein 39 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:27827494 | Fro9g01218 | Fro-Chr9:25051308 | dispersed | |
| Fro | Fro-Chr12:27827494 | Fro16g01448 | Fro-Chr16:23770459 | transposed | |
| Fro | Fro-Chr12:27827494 | Fro16g01569 | Fro-Chr16:25684873 | transposed |