AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02093 | ATGGGGAAGAGAAAGGAGCGTAGACTCACTGCTTCGAATCGAAGAGTAAAACTCGATCTTCTAGCGGAACCCTCTGGAGATTTTGGTGATTTGTCTAACCAAGAAGAAGTTGGGGTTGGCGGCAATGGAAAGCATCGTGCTGGGTCACCCAATTCACCATCTTCTTCAGGTCAAAGGCCAGAAAATCCTCTGTTGTTGCTTGGACAATACAGTGATGAAGAAGTGGAGGAAGATTCAAGTAAAGAAATAAACCATGATGCCAGAGAAAACTCTCCAACTGTGCTGGATGAGCAGGTACTGCTAGGCAATGATGATAGTACAGGAACAGTTGAAGACAAAAACCTTTATGCTGAAAATGGTGATCAAGAGAACAAAGAACCTTCTTCTTCAATGGATGTCTTGCCAAATTTGGAGAAAACTAGTGTTGTAGAAGATGATAAACATGAGCCTCCACAAAGCGAGACAGAGACGGTGGATCCGACCTCTGCTTCTTTGACATCTGATACGCAGAAGACAGCGGATGTGGATTCAGGCTGGAAAATGGTGTTGCATGAGGAGAGCAATTCATATTATTACTGGAACATCATGACTGGTGAAACTTCTTGGGAAGTCCCTGTTGTTTTGACCCAAGGAAATGAATCAACATCCGATCTCAAATCTGGCCCAGAAATAGGAGAAACACATGCAACTTCTGTTGATACACAAGCTAATAATGAATCCGCAAATTATATCATGGCAAATAATAAAGATGAGGGCCTTGCTACACAATCTTGTGATGTTTTGAGTAATGCGGAAGTCCACCATAATGATTATATTATTCAAGATACGAGTGGTCATGTATATAATGGGACAGGTGGTGAATCTTCTGATTCTTATCGTCTTCTGCAACTTGGTAAAGATCTGTCAGAAAGATTAAAATCTTTAAAAGGGTCTGAAGGGTTCAGTGACCGGATATCAAAGTTGATGTTTGAACTTGATATAAGACTTGCAGACATCAAGTCGCTAGTACCGTATGGATCATCGTTGCTTCCTTTTTGGTTGCATTCGGAAAACCAGCTCAAAAATCTGGAATCTTCCATCAACAATGAAGTTCTAAAACATTCACAATTCACAAATACTGGTCAAATTAATGAGTCAGATAACAGATTTCAGGGAAACATTGGTGAACCCCATGAAAATGTAATTCCAGCAGATATTGTTCCAAATGTGGGCCACCACTTGGTGGAAGATGATGACATGGATGTGGAGATGGAAGTTGAAGATACTGCAGTTCACTCTAAAGATGAAGTGGCTAACAATCCTAACTTGGATCAATCTATTTCACCAGCCATGCATGAACGCATTGATTCTCGTGGATCTGAACAAGACTCTGACGTTCCACTTCCTCCAAATGATGACTGGATTCCTCCTCCACCACCAGATGAAGAACCATTACCTCCTCCACCACCAGATGAGCCAACTGAATCTGCCTTCCCGCTGCCACCACCATCCGAGATGCAAACAACACAACCTTATTCTTTTGGAGAACAATACAGTTTTACATACCCGGGGTCTGGTCTTGAATACTATAGTCAAACAAACACTGAAATCCCGAGTAATGGTTATTATGTAGATGCTAATGGGTCTCATATAGCTGCTCCTCTCCCAAGCGTTTATTATGCACCAGGGCTGAATCCAGAGCCCGTGACGTATTACACCATACAAGGTGGGGCCATACCAACCACACCAGTCATCAGTGGTGTAGAAGCTTCTGGTTTACAGAATAACATCATTTCTGATAAAACCAAATCATCTGCAGTGGTTCCTTCTATTTCAGCCTCTTCTCATGTGCCAGAAAGTTCTAGTGTGACAGGTGATGTTTCAGTGGCGTCAGCTTCTGCTGTTGCTCCACCAGAAACAGTTTCTAAGGTTCAACCTAAAGTTGCACGTACCAAAAAAAGAACCGTTGCTGCTGTTCCCACATTAAGGTCCAACAAGAAAGTTTCTGGCTTGGTGGATAAGTGGAAGGCTGTTAAAGAGGAGTTGCATGAAGACGAGGAAGATGAACCTGAAAATGCATTAGAGGTTTTAGAGAAGAAACGTCAGCGAGAAATTGAGCAATGGCATGCCCAGCAAATTGCATCCGGAGAAGCCAAAGACAATGCAAACTTTCAGCCGCTTGGTGGTGATTGGCGGGAGAGAGTTAGGCGAAAGAGAGCTAAAAAATCAACACAAGATGAAGAAAATCCAGCACATGCCATAGATGAAACAAAACTACAGCCTGATGTTGCGGAACTTTCAAAACAACTCCCAACGGGATGGCAGGCATATTGGGATGAATCATCAAAGCAGGTTTATTATGGTAACTCGATAACATCAGAGACAACATGGACTAAACCTACGAAGTAA | 2388 | 42.46 | MGKRKERRLTASNRRVKLDLLAEPSGDFGDLSNQEEVGVGGNGKHRAGSPNSPSSSGQRPENPLLLLGQYSDEEVEEDSSKEINHDARENSPTVLDEQVLLGNDDSTGTVEDKNLYAENGDQENKEPSSSMDVLPNLEKTSVVEDDKHEPPQSETETVDPTSASLTSDTQKTADVDSGWKMVLHEESNSYYYWNIMTGETSWEVPVVLTQGNESTSDLKSGPEIGETHATSVDTQANNESANYIMANNKDEGLATQSCDVLSNAEVHHNDYIIQDTSGHVYNGTGGESSDSYRLLQLGKDLSERLKSLKGSEGFSDRISKLMFELDIRLADIKSLVPYGSSLLPFWLHSENQLKNLESSINNEVLKHSQFTNTGQINESDNRFQGNIGEPHENVIPADIVPNVGHHLVEDDDMDVEMEVEDTAVHSKDEVANNPNLDQSISPAMHERIDSRGSEQDSDVPLPPNDDWIPPPPPDEEPLPPPPPDEPTESAFPLPPPSEMQTTQPYSFGEQYSFTYPGSGLEYYSQTNTEIPSNGYYVDANGSHIAAPLPSVYYAPGLNPEPVTYYTIQGGAIPTTPVISGVEASGLQNNIISDKTKSSAVVPSISASSHVPESSSVTGDVSVASASAVAPPETVSKVQPKVARTKKRTVAAVPTLRSNKKVSGLVDKWKAVKEELHEDEEDEPENALEVLEKKRQREIEQWHAQQIASGEAKDNANFQPLGGDWRERVRRKRAKKSTQDEENPAHAIDETKLQPDVAELSKQLPTGWQAYWDESSKQVYYGNSITSETTWTKPTK | 795 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02093 | 795 | SUPERFAMILY | WW domain | 759 | 794 | IPR036020 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 96 | 113 | - | - | |
| Fro12g02093 | 795 | Pfam | WW domain | 177 | 205 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | Pfam | WW domain | 763 | 793 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 155 | 173 | - | - | |
| Fro12g02093 | 795 | ProSitePatterns | WW-rsp5-WWP domain signature. | 179 | 205 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | ProSiteProfiles | WW-rsp5-WWP domain profile. | 761 | 795 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | SUPERFAMILY | WW domain | 167 | 207 | IPR036020 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 139 | 154 | - | - | |
| Fro12g02093 | 795 | ProSiteProfiles | WW-rsp5-WWP domain profile. | 173 | 207 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 78 | 92 | - | - | |
| Fro12g02093 | 795 | Gene3D | - | 169 | 217 | - | - | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 47 | 62 | - | - | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 723 | 753 | - | - | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 463 | 499 | - | - | |
| Fro12g02093 | 795 | ProSitePatterns | WW-rsp5-WWP domain signature. | 767 | 793 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 1 | 173 | - | - | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 447 | 503 | - | - | |
| Fro12g02093 | 795 | CDD | WW | 177 | 206 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | CDD | WW | 764 | 794 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 709 | 753 | - | - | |
| Fro12g02093 | 795 | SMART | ww-5 | 174 | 207 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | SMART | ww-5 | 762 | 795 | IPR001202 | GO:0005515(InterPro) | |
| Fro12g02093 | 795 | MobiDBLite | consensus disorder prediction | 121 | 136 | - | - | |
| Fro12g02093 | 795 | Gene3D | - | 757 | 795 | - | - | |
| Fro12g02093 | 795 | PANTHER | OS06G0298400 PROTEIN | 288 | 384 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02093 | K24774 | formin-binding protein 4 |