AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02156 | ATGGCATCTGCCTTCCTTTCAAGAACACTCTTTGCCCATCGTTTCGTTTCATCTATCGGAATCAATCAAAACCCCCAAAAATTAGCTTCTGTTTTCTTTAAGAAACCTCTTCAATCGTGGGCTAGTCCAATCCATACGGCATATAGGTCTACCTTGGTTCGTTGTGATATGGCTACAAATGTGGCTGCATCCACAGCTTATTTTTCAACACGGTCCATGTCGACTGGGGAGCCTGTTGTTTCAGTTGACTGGCTCCATGCCAATCTGCGTGAGCCTGATTTGAAGGTGCTGGATGCATCCTGGTACATGCCTGATGAACAAAGAAATCCGCTCCAGGAGTACCAGGTTGCCCACATCCCAGGTGCTCTTTTCTTTGATGTAGACGGGATATCAGATCGAACTACTAATCTACCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGGTAAAGGGATCTTCAGCGCTGCTCGTGTCTGGTGGATGTTCCGAGTTTTTGGACATGATAGAGTATGGGTGTTGGATGGAGGGCTTCCCAGATGGCGTGCTTCTGGATTTGATGTTGAGTCTAGTGCTTCTAGTGATTCAATTTTGAAAGCTAGTGCTGCAAGTGAGGCGATAGAGAAAGTATACCAAGGCCAGCCTGTTGGTCCAGTTACATTTCAAACAAAATATCAGCCGCATCTTGTATGGACACTCGAACAGGTTAAAAAGAACATCGAGGACCAATCACATCAACACATAGATGCTCGATCAAAAGCCAGGTTTGATGGTGTTGCACCTGAGCCTCGAAAAGGAATAAGAAGCGGCCATGTGCCTGGGAGTAAGTGCATCCCTTTTGCCCAGATGTTAGACAGTTCACAGACACTGTTATCTGCAGACCAGCTCAAGAAAAAGTTTGAACAAGAAGGGATCGCATTGGACAAACCTGTCATGACTTCATGTGGGACTGGAGTTACTGCATGCATTCTTGCATTGGGACTCCATCGACTTGGGAAGACAGATGTTCCGGTTTATGATGGATCTTGGACAGAATGGGGAGCACAAGAAGAAGTTCCCGTAGCAACTTCAACTTCTTGA | 1131 | 45.62 | MASAFLSRTLFAHRFVSSIGINQNPQKLASVFFKKPLQSWASPIHTAYRSTLVRCDMATNVAASTAYFSTRSMSTGEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASSDSILKASAASEAIEKVYQGQPVGPVTFQTKYQPHLVWTLEQVKKNIEDQSHQHIDARSKARFDGVAPEPRKGIRSGHVPGSKCIPFAQMLDSSQTLLSADQLKKKFEQEGIALDKPVMTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAQEEVPVATSTS | 376 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02156 | 376 | SMART | rhod-4 | 80 | 204 | IPR001763 | - | |
| Fro12g02156 | 376 | SMART | rhod-4 | 248 | 369 | IPR001763 | - | |
| Fro12g02156 | 376 | Pfam | Rhodanese-like domain | 81 | 200 | IPR001763 | - | |
| Fro12g02156 | 376 | Pfam | Rhodanese-like domain | 249 | 365 | IPR001763 | - | |
| Fro12g02156 | 376 | Coils | Coil | 250 | 270 | - | - | |
| Fro12g02156 | 376 | ProSitePatterns | Rhodanese C-terminal signature. | 353 | 363 | IPR001307 | GO:0004792(InterPro) | |
| Fro12g02156 | 376 | Gene3D | - | 243 | 373 | IPR036873 | - | |
| Fro12g02156 | 376 | FunFam | Sulfurtransferase | 243 | 374 | - | - | |
| Fro12g02156 | 376 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 77 | 209 | IPR036873 | - | |
| Fro12g02156 | 376 | PANTHER | THIOSULFATE SULFERTANSFERASE | 75 | 374 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Fro12g02156 | 376 | ProSiteProfiles | Rhodanese domain profile. | 258 | 372 | IPR001763 | - | |
| Fro12g02156 | 376 | ProSitePatterns | Rhodanese signature 1. | 114 | 125 | IPR001307 | GO:0004792(InterPro) | |
| Fro12g02156 | 376 | FunFam | Sulfurtransferase | 72 | 214 | - | - | |
| Fro12g02156 | 376 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 251 | 374 | IPR036873 | - | |
| Fro12g02156 | 376 | CDD | TST-Repeat-1 | 79 | 202 | - | - | |
| Fro12g02156 | 376 | CDD | TST-Repeat-2 | 249 | 365 | - | - | |
| Fro12g02156 | 376 | Gene3D | - | 72 | 214 | IPR036873 | - | |
| Fro12g02156 | 376 | ProSiteProfiles | Rhodanese domain profile. | 90 | 207 | IPR001763 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02156 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fro1g01002 | . | 19 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 63.904 | 7.94e-171 | 481.0 | |
| Fro3g00778 | . | 44 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 80.447 | 8.12e-109 | 310.0 | |
| Fro4g01321 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 67.241 | 7.51e-108 | 308.0 | |
| Fro5g00416 | WGDA | 350 | 579 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 28.4 | 3.51e-17 | 77.8 | |
| Fro6g00008 | . | 147 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 30.918 | 8.41e-20 | 89.7 | |
| Fro6g00396 | WGDA | 17 | 144 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 70.0 | 2.23e-66 | 198.0 | |
| Fro6g01098 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 69.787 | 0.0 | 664.0 | |
| Fro7g00089 | . | 1 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 51.266 | 8.63e-138 | 401.0 | |
| Fro7g00490 | . | 43 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 52.703 | 4.82e-24 | 87.0 | |
| Fro8g01415 | . | 45 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 62.774 | 6.46e-60 | 183.0 | |
| Fro8g01486 | . | 45 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 60.584 | 1.32e-55 | 172.0 | |
| Fro8g01644 | . | 81 | 216 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 32.117 | 1.44e-11 | 64.3 | |
| Fro11g02906 | . | 82 | 474 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 73.791 | 0.0 | 594.0 | |
| Fro11g03304 | . | 72 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.342 | 3.49e-169 | 480.0 | |
| Fro12g02002 | . | 16 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 65.285 | 0.0 | 776.0 | |
| Fro12g02156 | . | 1 | 377 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 72.178 | 0.0 | 574.0 | |
| Fro14g01171 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 57.576 | 8.88e-82 | 241.0 | |
| Fro15g01206 | . | 346 | 565 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.273 | 1.83e-14 | 70.1 | |
| Fro15g01207 | WGDA | 346 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 29.258 | 1.20e-14 | 70.5 | |
| Fro15g01362 | . | 24 | 149 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 55.118 | 9.14e-45 | 142.0 | |
| Fro16g00151 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 69.231 | 4.48e-107 | 311.0 | |
| Fro16g00463 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 23.963 | 1.30e-10 | 61.2 | |
| Fro16g02171 | WGDA | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 66.412 | 6.76e-63 | 187.0 | |
| Fro17g00656 | . | 1 | 231 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 66.809 | 1.12e-112 | 320.0 | |
| Fro17g00832 | . | 342 | 577 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 28.287 | 1.91e-18 | 82.0 | |
| Fro17g00833 | . | 295 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 25.818 | 4.94e-18 | 81.6 | |
| Fro17g01472 | . | 1 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 64.865 | 4.27e-140 | 395.0 | |
| Fro17g01475 | . | 1 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 64.865 | 4.27e-140 | 395.0 | |
| Fro18g00290 | . | 82 | 257 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 42.135 | 7.17e-32 | 122.0 | |
| Fro18g00657 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.36e-08 | 49.7 | |
| Fro10000221.1g00007 | . | 72 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.342 | 3.95e-169 | 480.0 | |
| Fro10000325.1g00002 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 23.963 | 1.30e-10 | 61.2 |