AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02176 ATGAACATTGAAATCTATGGTAGGCATGCTCTTCTCTTCGACGATGATACATCCGCAGCCTTCGTAAACTCCAACGACGCACTTGTTGAATGGAATTCGCTGTTAATCGATCGTTATGACGTCCGGCATCTCCTCTCCAGCCCTCCGCCGTCTCGGCGGCGGCGGAACCCACAAACGTCGCACTCGTCTTCCGCCGATGCGGACCTCGATTATGAACGGTATCTGGATCTCCCCCCACCGTCGGAGGAAGAAGAAGAAGATGCAAAACCAGAACCCGTGGGTGGATTTAATGCAGTTCCATTTTCTTATGGAAATGATGAGAATGATCAACAGACTGCCGAGACTGAACAAGAAGTTCCTAAATTTCATCCCCCCTTCCCTGTACCTGACAGCCTTGTTCAAAACTTGCCTCCTACGGAGAAAGTACATCAGATTATTGCAAGGACTGCTCTTTTTGTCAGTAAAAATGGTGGTCAATCAGAGATTATTTTGAGGGTGAAGCAAGGAGACAACCCAACATTTGGGTTCTTAATGCCAGATCATCATCTCCATCCGTACTTCAGGTTTCTGGTTGACAACCAGGATCTCTTACAATCAAAAGAAAACGGGCAGCCTGAAAATGAGGAGAAAATATCAAATGCTGGAGCATTATCTTTACTTGGTTCTGTGTATGGTACTGGTGAGGATGATGATGGTGGAACAGAGGATCCATCATCATCTAAAGAATGTGTATATGCGAATAATGTTAGCGTAGAAGCTACTGCTCCTCTTGTAGAAGGGAAAACCATGCTGCCGTCTGGCAAAGATGAGCCTATTCTAAAAAGAAATTCTCTCTCAAATGCGTTGAAATCTGGAAGAACTAGTAGTCTTAAGAAAGGCGAGGTTTCAGCTTCACTAGCTTCTGTTCCAGATAAGTCGCGAGCTTCCTCTCTACCTCCAATTCCCAAAACTGAGCTCATGCTTGTGGACCCACCATCTGACATGAAACGGTTGGTTGAAAAGATAGTGGAATTTATCCTCAAGAATGGGAGGCAGTTTGAGGCTGTACTTATGGAGCAAGATCGTGGTCATGGAAGGTTCCCGTTTTTAATCCCATCTAATATATTCCATCCATACTATCTGAAAGTTCTCCAGAAAGCCCAAGAGTCGAAATTAGCTGTCAAAAGTCTTTATGACGAAAAAGATGATTTCCGAGGACATATCTCAAGCAAGAAAAAGTCTACCTTGAGGGAGAATGAGAATAATATGATGGAATCTGATGATATACCACTTGATTCTGAAAGAAAAGAGAAGTTTAAGATGGTAATTAACAAGTCTAAAAAAGAAGGATCAGATTTGCCAGCTAAATCCACACAATCACCACCTAGAGTCCAGGTGGATGCTGATCAAGCAGCAGCCATTCTTCAAGCTGCTACTAGAGGCATTAAACCTTCAAATTTGGGAATTTTGTATGGGCAACCATCTAATGAAGCCGGTTCGTCTGAATCACATTTGACACACGAGCAAAAATTAAAAGCTGAGAGGCTGAAACGGGCCAAGATGTTTGTGGCTCAGTTGAAAAGTGGGGCAGTTCCATCAAAAGCTGAGCCCTCACGTTGCTCATCAGCTGAGCCACCAGCTGATAACCGCCCTGCAGCCAAAGAAACCGAGAAGAGCACATCTCCTTCAGATCTTGATACTTCAGATAAAAAACTAAAACCAGAAAAAGAACATTTGAATGAGGAGAAACGAGCAATGAGAATTTACCGTGCTCGTTCGGTTGGAGAAAAAAAAGATGATGATGACAACGACGATGATGATGAGAGAGAAAGAAAAAGGTCACATCGACATCATAAGAAGAAACATCGATCTCATAATCATTCAGTTGAAGACGAGAGAGAAGAAAAATATGTAGATGAGAGAGATCATAAACATGCAAAAAGAAGACACCGATCTCATCATTCTTCCCATAAACATGATGACATAGACAAAACCATAGAAGAAAAGGATCAAAAGTATTCAAAGAAGAAACATAGATCTTCTAGTTCTTATGAAGATGATGAACAAGAAAGTGAACATGACTATTCTAGAAAGAAACATCAATCTCATCATTCTTCACATGATGAAGCTGACAGTGATGATAAATATTCTAGGAAAAAACGAAAACATAGCTCTCATAAATCTTCTCATAGGCACAAGCATAGGAAAAGTCACTCTTCTAGACTTATACAGAAGACTGATGCGTCTTCAGAAGAGGAGTCGATGGACCAAAATAAGGCTGATAAGAATGTCAAGGGACCATACTCGGGAAGAGAGCTTGAAGACGGGGAGATATCAGGTCCAGCAAAAGGGGGAGCATTGATTGATGGTGGGGCTAGTAGAGAACCTTCGGTTGATGTATCAAGTTCGGTTCAAGATCCAAGGTCGCTGACTCAGCCATCTGGAACAACTGAGGTTTCTGATGATCTTCGGGCTAAAATCAGAGCTATGCTGATGTCGACATTGTAA 2487 42.3 MNIEIYGRHALLFDDDTSAAFVNSNDALVEWNSLLIDRYDVRHLLSSPPPSRRRRNPQTSHSSSADADLDYERYLDLPPPSEEEEEDAKPEPVGGFNAVPFSYGNDENDQQTAETEQEVPKFHPPFPVPDSLVQNLPPTEKVHQIIARTALFVSKNGGQSEIILRVKQGDNPTFGFLMPDHHLHPYFRFLVDNQDLLQSKENGQPENEEKISNAGALSLLGSVYGTGEDDDGGTEDPSSSKECVYANNVSVEATAPLVEGKTMLPSGKDEPILKRNSLSNALKSGRTSSLKKGEVSASLASVPDKSRASSLPPIPKTELMLVDPPSDMKRLVEKIVEFILKNGRQFEAVLMEQDRGHGRFPFLIPSNIFHPYYLKVLQKAQESKLAVKSLYDEKDDFRGHISSKKKSTLRENENNMMESDDIPLDSERKEKFKMVINKSKKEGSDLPAKSTQSPPRVQVDADQAAAILQAATRGIKPSNLGILYGQPSNEAGSSESHLTHEQKLKAERLKRAKMFVAQLKSGAVPSKAEPSRCSSAEPPADNRPAAKETEKSTSPSDLDTSDKKLKPEKEHLNEEKRAMRIYRARSVGEKKDDDDNDDDDERERKRSHRHHKKKHRSHNHSVEDEREEKYVDERDHKHAKRRHRSHHSSHKHDDIDKTIEEKDQKYSKKKHRSSSSYEDDEQESEHDYSRKKHQSHHSSHDEADSDDKYSRKKRKHSSHKSSHRHKHRKSHSSRLIQKTDASSEEESMDQNKADKNVKGPYSGRELEDGEISGPAKGGALIDGGASREPSVDVSSSVQDPRSLTQPSGTTEVSDDLRAKIRAMLMSTL 828
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02176 828 MobiDBLite consensus disorder prediction 543 592 - -
Fro12g02176 828 MobiDBLite consensus disorder prediction 51 65 - -
Fro12g02176 828 MobiDBLite consensus disorder prediction 283 311 - -
Fro12g02176 828 SMART DRY-EERY-2 1 107 IPR019147 -
Fro12g02176 828 ProSiteProfiles SURP motif repeat profile. 145 187 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 MobiDBLite consensus disorder prediction 45 132 - -
Fro12g02176 828 MobiDBLite consensus disorder prediction 789 812 - -
Fro12g02176 828 ProSiteProfiles SURP motif repeat profile. 331 373 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 Gene3D Surp module 138 193 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 PANTHER SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT 3 619 IPR040397 GO:0000395(PANTHER)
Fro12g02176 828 Pfam Alternative splicing regulator 3 87 IPR019147 -
Fro12g02176 828 SUPERFAMILY Surp module (SWAP domain) 120 192 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 MobiDBLite consensus disorder prediction 649 711 - -
Fro12g02176 828 MobiDBLite consensus disorder prediction 520 815 - -
Fro12g02176 828 Gene3D Surp module 317 386 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 MobiDBLite consensus disorder prediction 222 241 - -
Fro12g02176 828 SMART surpneu2 329 382 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 SMART surpneu2 143 196 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 Pfam Surp module 329 378 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 Pfam Surp module 144 192 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 MobiDBLite consensus disorder prediction 618 635 - -
Fro12g02176 828 MobiDBLite consensus disorder prediction 712 733 - -
Fro12g02176 828 SUPERFAMILY Surp module (SWAP domain) 305 378 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Fro12g02176 828 MobiDBLite consensus disorder prediction 734 771 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02176 - -