AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02197 ATGGCACCCCCTTCTTCATCACCATCAACCTTCATCTCCAAAACCCACTTAGCAGCAACCCTAATCATCACCACCCTCCTCGCTTGTACCCTCACTCCCAACGTACAAGCCCTCAAAGCACCAATTCGTCCCGAAGACATACTCCCCCTTTTGCCCCGTCAAGTTTCATGGCCTCTGCTCAACAGCCTCCGCGGTGCCGCCGATCTCCTCCCGAGCTTCGTCGGCGCCGCCTCGGTGGCCAATAACTCCGTTTTGCATTGGAAAGGCTCGTGCTTTTATGACAACACTGCGTGGTTAGAGCTACATAATAAAAGTGGTAGTGAGTTTGGTGGGGGTACTCTTCATATTAAGGTGAGCAATGCACACAGCTGGACATGTATGGATATTTATGTCTTTGCAACTCCGTATCGTGTGACGTGGGACTATTATTTTCTGTCGCGTGAGCATACACTTGAGTTTGATGAATGGAGCGGGAAAGCTGAGTATGAATATGTGAAACATAAAGGAGTTTCAATTTTTCTCATGGAAGCAGGAATGATAGGAACCCTAGAAGCATTATGGGAGGTCTTCCCTTTATTCACAAATACGGGTTGGGGGGAGAGTTCTAATCTTGCTTTTCTCGAGAAACATATGGGAGCTACTTTTGAAGCACGGCCTGAACCATGGGTAACAAACATAACCCAAGATGATATCCATTCAGGGGATTTCCTTGCAATATCAAAAATTCGTGGTAGATGGGGCGGGTTTGAGACCCTCGAAAAATGGGTATCCGGGGCATACGCAGGTCATTCTGCTGTTTGCTTGAGGGACCCGCAAGGAAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGCCAAGATGTTATTGCTTTGTTGCCATGGGATGAGTGGTGGGATTTTGAGTTGACTAAAGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCACCCCGATCTGCGGTCTAGATTTAATGAAACTGCAGCTTGGGAGTATGCACAAAGTATGGTTGGGTTGCCATATGGTTATCATAACTTGATCTTTAGTTGGATAGATACTGTCAGTGATAATTATCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACTGTGTGGGACCAAATGCAGCCTGCATATGCGGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTGAGGGGCTTCAACTCTCTGATATTTTAGTGGAAGTTGAAAGACGTGGTTCGTCTTTTGCTGAATTACTAACTATACCCGAACAAGATGATTGGGTATATGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTTGTCCTTGAAATGTACAAAGAAGCAGGGCTCTTTGGAGATCTCGCAGACCAAATTCAAGTTACTGAGTTCACGATAAAGGATGCATACACGCTCAACTTCTTTGAAAACAATTCGAGCCGCCTGCCAAAGTGGTGTAACGAAGGCGACACGGTTGACCTTCCATTTTGTCAAATCAAAGGAAAATATCGAATGGAATTACCAGGATTCAATACCATTGACCCGTACCCGCATATGACAGAAAAATGCCCATCATTGCCCCCGGATTATTCAAGACCCCAGTACTGCTGA 1614 45.42 MAPPSSSPSTFISKTHLAATLIITTLLACTLTPNVQALKAPIRPEDILPLLPRQVSWPLLNSLRGAADLLPSFVGAASVANNSVLHWKGSCFYDNTAWLELHNKSGSEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKHKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLEKHMGATFEARPEPWVTNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWDFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTEGLQLSDILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFFENNSSRLPKWCNEGDTVDLPFCQIKGKYRMELPGFNTIDPYPHMTEKCPSLPPDYSRPQYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02197 537 PANTHER OS01G0793500 PROTEIN 17 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02197 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
92679 Fro12g02197 Fro6g01083
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2515589 Fro Fro10g01217 Fro-Chr10:20483018 Fro12g02197 Fro-Chr12:29356708
2519991 Fro Fro12g02197 Fro-Chr12:29356708 Fro13g00092 Fro-Chr13:1219505
2561612 Fro Fro12g02197 Fro-Chr12:29356708 Fro6g01083 Fro-Chr6:17557030