AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02261 ATGGGGAGAGCAGGAAGAGATTGGACTCAGATCTACGCAATATACGGCATGGAGGATTGGCAGACACCGATATTTCTTCTGATCCACGCGATAATCTTCTCAGCTTCATCGATCTTATTCCTCCTATACTTCAACTGGATCTGCTACTTATTCGAATCAATTTCTCCTTCAATATTCTCCACCAGTTTCGCCCGCTTCACCGCCGGATTCACCGGCTCCGTCATGGCTCTCTCCGCCGTGTGCCTCTTCTACGCCGCCGGCAACATGTTCTACTCCTCCGTCGCCCTCCGGTGGGACATGGCACAGCGGATGCTCACCGCCGTCCACGACTGGTCCTCCGTCAGGACCGTCCTCGACGTCGGCTGCAGCCGCGGCGTCCTCCTCAACGCCGTCGCGATGGAGCTCAAAAAGCAAGGCAGCTCCGGCAGCGTCGTAGGGTTAGACCGCAAAACCACCACGTTAACCACCCTCCGCACGGCGGCGATGGAGGGCGTTCAGGAGTACGTCACGTTCCGTGAGGGTGACGCTCGCCGTCTGCCTTTCCCGGACAACCACTTCGACGTGGTGGTCTCGGCGGCGTTCGTTCACAAGGTGGGGAAGGAATTCGGAACAAAGAGCGCGGCGGCAGCGGCGGAGAGGATGAGGGCGGTGGGGGAGGTGGTGAGGGTGCTGAAGGAGGGTGGCGTAGGGGTGGTGTGGGACCTTGTGCATGTGCCGGAGTACGTTCTCCGGCTGCAGGAGTTGAAGATGGAGGAGATCAGAGTGTCGGAGAGGGTAACGGCGTTTATGGTCAACAGCCATATCGTGTCGTTTCGGAAGCCCACCCAGCACGTGATAGGCCCCAATGAAGTCAGATTGGATTGGAGATTCAACAATATGTTTTGA 885 57.85 MGRAGRDWTQIYAIYGMEDWQTPIFLLIHAIIFSASSILFLLYFNWICYLFESISPSIFSTSFARFTAGFTGSVMALSAVCLFYAAGNMFYSSVALRWDMAQRMLTAVHDWSSVRTVLDVGCSRGVLLNAVAMELKKQGSSGSVVGLDRKTTTLTTLRTAAMEGVQEYVTFREGDARRLPFPDNHFDVVVSAAFVHKVGKEFGTKSAAAAAERMRAVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEEIRVSERVTAFMVNSHIVSFRKPTQHVIGPNEVRLDWRFNNMF 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02261 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Fro12g02261 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
Fro12g02261 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 91 247 IPR029063 -
Fro12g02261 294 Gene3D Vaccinia Virus protein VP39 84 261 IPR029063 -
Fro12g02261 294 CDD AdoMet-MTases 116 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02261 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
92701 Fro12g02261 Fro16g00303
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:30029818 Fro6g01049 Fro-Chr6:17199968 dispersed
Fro Fro-Chr12:30029818 Fro16g00303 Fro-Chr16:3505894 wgd