Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02295 | ATGGCCGGAGTTCTCGAAACCCTCACCGTCCCTCGCGCCACCGGAGCTCCGACGGCCTCTATAACTCCGATCACCTCTTCTCCGGTCTCTCAACTCTTCCTTCGCCGGAGCTTTCTGCCGGAATCCAGAGGCTCCAAGTTAAATATCAATTCCTACCGTTCGTCTGGATCCGTGAGATTGAGGTCGAACTTCGATCGTCGTGGTGGACGAATCGTATGCGAAGCACAGGAAGCAGCCGTACAAGTGCTTCCTGTGACTGATGGAGCATGGCAATCACTTGTTCTGGATTCTGATCTTCCTGTACTGGTTGAGTTTTGGGCTCCATGGTGCGGGCCATGTCGCATGATCCACCCGATCATTGACGAACTCGCGAAAGAGTTCAACGGCAAGCTCGCTTGTTACAAGGTGAATACCGATGAGAGTCCTTCAATCGCTACCAGATATGGTATTAGAAGCATCCCAACTGTCATCATCTTCAAAGGTGGAGAGAAGAAAGAAGCAGTAATTGGTGCTGTTCCAAAATCAACTCTGTCTACCTGCATTCAGAAGTTTTTATAA | 558 | 50.0 | MAGVLETLTVPRATGAPTASITPITSSPVSQLFLRRSFLPESRGSKLNINSYRSSGSVRLRSNFDRRGGRIVCEAQEAAVQVLPVTDGAWQSLVLDSDLPVLVEFWAPWCGPCRMIHPIIDELAKEFNGKLACYKVNTDESPSIATRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLSTCIQKFL | 185 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02295 | 185 | Pfam | Thioredoxin | 82 | 182 | IPR013766 | - | |
| Fro12g02295 | 185 | PRINTS | Thioredoxin family signature | 101 | 109 | - | - | |
| Fro12g02295 | 185 | PRINTS | Thioredoxin family signature | 109 | 118 | - | - | |
| Fro12g02295 | 185 | PRINTS | Thioredoxin family signature | 149 | 160 | - | - | |
| Fro12g02295 | 185 | Gene3D | Glutaredoxin | 81 | 185 | - | - | |
| Fro12g02295 | 185 | ProSiteProfiles | Thioredoxin domain profile. | 72 | 185 | IPR013766 | - | |
| Fro12g02295 | 185 | PANTHER | GEO12009P1 | 57 | 185 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Fro12g02295 | 185 | SUPERFAMILY | Thioredoxin-like | 75 | 185 | IPR036249 | - | |
| Fro12g02295 | 185 | FunFam | Thioredoxin | 76 | 185 | - | - | |
| Fro12g02295 | 185 | CDD | TRX-family | 90 | 177 | - | - | |
| Fro12g02295 | 185 | ProSitePatterns | Thioredoxin family active site. | 102 | 120 | IPR017937 | - | |
| Fro12g02295 | 185 | NCBIfam | thioredoxin | 87 | 184 | IPR005746 | GO:0015035(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02295 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 92706 | Fro12g02295 | Fro4g00522 | |
| 92707 | Fro12g02295 | Fro7g00722 | |
| 92708 | Fro12g02295 | Fro9g01322 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:30278341 | Fro12g02295 | Fro-Chr12:30421742 | dispersed | |
| Fro | Fro-Chr12:30421742 | Fro2g01387 | Fro-Chr2:17346770 | dispersed | |
| Fro | Fro-Chr12:30421742 | Fro7g00721 | Fro-Chr7:8406108 | wgd | |
| Fro | Fro-Chr12:30421742 | Fro9g01322 | Fro-Chr9:26047755 | wgd |