Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02298 | ATGACTGGAGTGCCATTGGATTTAAGAGCACAGAGTTATGGATCACCACAACAGTCACAAAACGGTTCGTTGCAGACTCAAAATGGGTTCACTGCACGCAAGCCTTCGAGGATGTCCCTCTCTGTTTCAAGGGAGAAAGATAAATTTCTTCCTTTTTTGTGTAGATATCTAAGTAGAAAGAAGATTGTAATGATGGTTTTAGCTACATTTGCACTCATGGCTTTCCTATCAGGGTTCTTTACGGCCAGTAGAGAAGATGCATCAGAGAGCTCGATCTTCAATCATTTTAGTGATGCTTATAATACCTCTTTTCAGTTCTCAAGAACGTTTCGTGGTCAGAAAGATGGTAATTCTAATATACAAGGAACTCTGTCGGTATGTGAAGAAAATCCTCCTACCCGGCATACTTTCAGTGCATCACATTCCACAGGATCTGTCCCTTCTCATAGCAATTTTTGTCAAAATTTTGCATTTCCACCCCCTCCTCCAGGTGATAGGAGACGGCCTGGACCTAGACCTTGTCCTGTGTGTTACCTTCCAGTGGAGGAAGCTATGGCTAGCATGCCGACTGCCACGTCAGGATCACCTGTTCTTCAACACTTAACTTATTTTCATGAGGAGACTTCTACTAAAACCGAACCACATGAAGGATCAGATTTTGGTGGGTATCCTTCCATAAGGCAAAGGAATGAATCTTTTGATATTAAAGAATCAATGACTGTACATTGTGGATTTGTAAAAGGTTGCAGACCTGGTTACAAAACTGGATTCGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAATTTCATGATATTATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAGCAGCCGACTAAGATTAGTGAGGCTGCAAGTAAAAACATACCATTTTATATGTTTATTGATGAAGAAACTGAAGCATATATGAGAAATTCTAGCGCTTTGGACTATAGAATGAAGGTTGGATTATGGAGAATTATTGTTGTGCATAATGTTCCTTACACGGATTCTAGACGAAATGGAAAGGTCCCGAAGCTTTTACTACACAGACTCTTTCCAAATGTTCGGTATTCCATATGGATTGACGGAAAGCTGCAACTTGTTGTGGACCCATATCAACTTCTCGAAAGGTTTTTGTGGCGCCACAATGCTACTTTTGCGATTTCAAAACATTACAGGCGGTTTGATGTGTTTGAAGAAGCTGAAGCTAATAAAGCTGCAGGGAAATACGACAATGCATCCATTGATTACCAGATTAACTTTTACAAAAACGAGGGTCTAACACCTTATTCTAAGGCTAAGCTTCCTATAATCAGTGATGTTCCGGAAGGGTGTGTCATTATAAGAGAACATATTCCAATAACGAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACCTCAAGAGATCAGTTAAGTTTTGCTACTGTAAGAGACAAAATCATGGCTCAAGTCAACTGGAGTATTAATATGTTTATGGATTGTGAAAGAAGGAATTTTGTGATACAGGCATACCATAGAGATCTACTAGAGCACATGCCACCACCTGCTGCTAAAATGAGCAGTCCAAGACGGGCACGAGTTAATGTTCCTGTTACAGTTCCTATACCTGTGAGGGGTAATAATTCATCAGCCAAAAGTTCGGTTAAGAAAGCCGCTGTTAAACGAGGGAAAGGAGAGAGGAGATCTCGTTCTAGAAGGCATTCGAAGAATCCCGGTAATAGGGACAACACGTTCATTTGA | 1767 | 40.46 | MTGVPLDLRAQSYGSPQQSQNGSLQTQNGFTARKPSRMSLSVSREKDKFLPFLCRYLSRKKIVMMVLATFALMAFLSGFFTASREDASESSIFNHFSDAYNTSFQFSRTFRGQKDGNSNIQGTLSVCEENPPTRHTFSASHSTGSVPSHSNFCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPTATSGSPVLQHLTYFHEETSTKTEPHEGSDFGGYPSIRQRNESFDIKESMTVHCGFVKGCRPGYKTGFDIDVSDLVELEQFHDIIVASAIFGNYDVIQQPTKISEAASKNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNVPYTDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQINFYKNEGLTPYSKAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAAKMSSPRRARVNVPVTVPIPVRGNNSSAKSSVKKAAVKRGKGERRSRSRRHSKNPGNRDNTFI | 588 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02298 | 588 | PANTHER | ALKALINE CERAMIDASE-RELATED | 36 | 552 | IPR006852 | - | |
| Fro12g02298 | 588 | MobiDBLite | consensus disorder prediction | 11 | 38 | - | - | |
| Fro12g02298 | 588 | Pfam | TOD1-MUCI70, glycosyltransferase-like domain | 201 | 514 | IPR048354 | - | |
| Fro12g02298 | 588 | MobiDBLite | consensus disorder prediction | 543 | 588 | - | - | |
| Fro12g02298 | 588 | MobiDBLite | consensus disorder prediction | 559 | 577 | - | - | |
| Fro12g02298 | 588 | MobiDBLite | consensus disorder prediction | 11 | 39 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02298 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:1128838 | Fro12g02298 | Fro-Chr12:30437701 | dispersed | |
| Fro | Fro-Chr12:4340690 | Fro12g02298 | Fro-Chr12:30437701 | dispersed | |
| Fro | Fro-Chr12:30437701 | Fro13g00676 | Fro-Chr13:8738698 | dispersed | |
| Fro | Fro-Chr12:30262993 | Fro12g02298 | Fro-Chr12:30437701 | wgd |