Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02312 | ATGGCTACCAATTCAGTTGAGGTCGAAAATGTTGAAGAATCAAAAGTTCATGTCTTCTCATCGTCATCAGATTTGCTTGAGAAGTTGCATCAGAAGTGGAAATCAGTTGAGAAACTGCCATACCCTGCAATGTATTCCAGTGTTTATGGTGGGATTATTCTTGATCCTGCTATGATGGTCATCCCGATTGATGATCATATGGTGCATCGAGGCCACGGTGTGTTCGACACCGCTGTCATCCTTGATGGATACCTGTATGATCTCGAGGGTCATCTTGATCGAATCCTCATATCCGCATCGAAAGCCAAGCTCTCGCCTCCATTCCCAAGATCAACTCTTCGATCGATCCTTATCCAGCTGGCAGCCGTATCAAAATGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCAGGACCAGGGGATTTCTTGCTTACTCCTTCAGAGTCCACAACATCTGCTTTCTACGCAATCGTTCTTGATGAAGAATTCTCGCAGTGTAAAGAAGGCGTAAAGGTGATAACTTCCACAATCCCCATGAAAGTCCCTATGTTTGCTACAAGCAAGAATGTGAATTACCTCCCAAATGTACTGTCAAAGCTTGAAGCAGAAGAGAAAGGTGCATTTGCATCAATTTGGGTGGATGACGAAGGGTATGTCGCTGAGGGTCCGAATGTGAACGTTGGTTTTGTGAGCCGCGAAAAAGAGCTCATTTTGCCATATTTTGACAAGGTTTTAAGCGGGTGTACTGCGAACAGACTTCTTGAATTAGCTCCAAAGCTGATTGAAAATGGGAGTTTGAAGGGTGTGAGAACTGGGAATTTGACAGTTGAGGAAGCCAAACAAGCTGCTGAAATGATGTACATTGGTAGCACACTTCCTTTACTGCCAATTATTGAGTGGGATGAGAAGCCGATTGGCGATGGGAAAGTTGGGGAGTTGACAATGGCGCTATCGGATCTGATTTGGGAAGATATGGTGGCTGGTCCAGAGACACACAGGATAAAGGTTCCTTACGCGTAA | 1020 | 44.51 | MATNSVEVENVEESKVHVFSSSSDLLEKLHQKWKSVEKLPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAVILDGYLYDLEGHLDRILISASKAKLSPPFPRSTLRSILIQLAAVSKCKKGTLRYWLSAGPGDFLLTPSESTTSAFYAIVLDEEFSQCKEGVKVITSTIPMKVPMFATSKNVNYLPNVLSKLEAEEKGAFASIWVDDEGYVAEGPNVNVGFVSREKELILPYFDKVLSGCTANRLLELAPKLIENGSLKGVRTGNLTVEEAKQAAEMMYIGSTLPLLPIIEWDEKPIGDGKVGELTMALSDLIWEDMVAGPETHRIKVPYA | 339 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02312 | 339 | Gene3D | - | 161 | 330 | IPR043132 | - | |
| Fro12g02312 | 339 | SUPERFAMILY | D-aminoacid aminotransferase-like PLP-dependent enzymes | 49 | 326 | IPR036038 | GO:0003824(InterPro) | |
| Fro12g02312 | 339 | FunFam | D-alanine aminotransferase | 161 | 328 | - | - | |
| Fro12g02312 | 339 | PANTHER | AMINO-ACID AMINOTRANSFERASE | 33 | 330 | IPR050571 | GO:0019752(PANTHER) | |
| Fro12g02312 | 339 | Gene3D | - | 13 | 159 | IPR043131 | - | |
| Fro12g02312 | 339 | FunFam | D-amino-acid transaminase, chloroplastic | 21 | 159 | - | - | |
| Fro12g02312 | 339 | Pfam | Amino-transferase class IV | 73 | 300 | IPR001544 | GO:0003824(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02312 | K18482 | 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:30611076 | Fro16g01198 | Fro-Chr16:19467448 | dispersed |