Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02361 | ATGGCTTCTTCTTCCCATTTCATCTCTTTAATGCTATTTTTTCTCTCTTTTCAACTGTTTTCCACCATTTCTGAAGCTGTTGTGCCTGCTTCAGAAACCTTCACTTACGTTAACGAAGGCGATTTCGGCGATTACATTGTCGAATACGATGCCAATTATCGCGCTCTTCCCCCTTTCAGCAACCCATTCCAGCTCTGCTTCTACAACACAACCCCTAACGCATTCACTCTAGCCCTCCGCATGGGCACCGTTCGATCCGAATCCCTCATGCGCTGGGTCTGGGAAGCTAACCGTGCCAACCCCGTTCGCGAAAACGCCACCCTGTCCTTCCGGACGGACGGGAACCTGGTCCTCGCGGACGCCGACGGACGGGTCGTGTGGCAAACGAACACCGCCAACAAGGGTGTGGTTGGTTTTCAGGTGCTCCCCACCGGTAACATGGTTCTTCATGACGGTAATGGTAATTACTTATGGCAAAGCTTTGATTCACCAACTGACACTCTTTTAGTGGGTCAAACGCTTCGCGCCAGTGGTCCGAATAAGCTCGTGAGCCGGCTTTCGGAGGTGAGCAACGTCGACGGACCGTATAGTTTGGTGATGGAGCCGAAAGGGTTAGCCATGTATTACAAAAGCCCGCACTCGCCTCGACCAATGCTATACTGGTCGTCTCGCGAATGGTTCACCATTGACAGAGGTAGTTTGAGCAACCTAACGCTTACATCCGTCCCAGACACCGATGAGGGCTTTCTCTACTACTTGGCGTTCGAGTACTTCACCACAAACCCGATATCATCCTCGAACCGCAACATGGCGTATACGCGATACAACAACACGTTATCGTATCTTCGGTTAGGGATAGACGGGAACCTTAGGTTCTACACGTATAACCCGAATGTGCAAGGGGTGGCGTGGGAGTTGGTGTACACGTTTCTCGATCGGGATTCGATGGAAGGCGAGTGTCAGTTGCCGGGGCGATGTGGGAACTTTGGGTTGTGTGAGGATAGCCAGTGTGTCGCGTGCCCGACGCCGAATGGGCTAAGTGGCTGGAGCAAAGAGTGTGAGGTGAAAAAGGTGACATCTTGTAAAGCAAGTGACTTTTATTATCACAAGCTTGAAGGGGTTAATCATTTTATGATCAAGTACACGAGGGGCGACGCGACGAAACAAAACGATTGCGAGAGCAAATGCACGAGTGATTGTAAGTGCATGGGGTATTTCTATCACACCGATAGCTCGAGGTGTTGGATTGCTTACGATTTGAAGACGTTAACACGAGTTGGGAACTCAACTCATTTGGCGTACATCAAAACACCCAACAAGTAG | 1323 | 50.42 | MASSSHFISLMLFFLSFQLFSTISEAVVPASETFTYVNEGDFGDYIVEYDANYRALPPFSNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRANPVRENATLSFRTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGNGNYLWQSFDSPTDTLLVGQTLRASGPNKLVSRLSEVSNVDGPYSLVMEPKGLAMYYKSPHSPRPMLYWSSREWFTIDRGSLSNLTLTSVPDTDEGFLYYLAFEYFTTNPISSSNRNMAYTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKECEVKKVTSCKASDFYYHKLEGVNHFMIKYTRGDATKQNDCESKCTSDCKCMGYFYHTDSSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 440 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02361 | 440 | SMART | blect-4 | 47 | 164 | IPR001480 | - | |
| Fro12g02361 | 440 | Gene3D | - | 95 | 224 | IPR036426 | - | |
| Fro12g02361 | 440 | Pfam | D-mannose binding lectin | 93 | 177 | IPR001480 | - | |
| Fro12g02361 | 440 | CDD | PAN-AP-plant | 360 | 438 | - | - | |
| Fro12g02361 | 440 | Pfam | S-locus glycoprotein domain | 232 | 345 | IPR000858 | GO:0048544(InterPro) | |
| Fro12g02361 | 440 | ProSiteProfiles | PAN-Apple domain profile. | 361 | 438 | IPR003609 | - | |
| Fro12g02361 | 440 | CDD | B-lectin | 47 | 164 | IPR001480 | - | |
| Fro12g02361 | 440 | ProSiteProfiles | Bulb-type lectin domain profile. | 31 | 162 | IPR001480 | - | |
| Fro12g02361 | 440 | FunFam | Os04g0303100 protein | 83 | 216 | - | - | |
| Fro12g02361 | 440 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 56 | 438 | IPR051343 | - | |
| Fro12g02361 | 440 | PIRSF | SLG | 1 | 440 | IPR035446 | - | |
| Fro12g02361 | 440 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 72 | 211 | IPR036426 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02361 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:31304900 | Fro12g02381 | Fro-Chr12:31545379 | dispersed | |
| Fro | Fro-Chr12:31298246 | Fro12g02361 | Fro-Chr12:31304900 | tandem | |
| Fro | Fro-Chr12:31304900 | Fro12g02362 | Fro-Chr12:31312249 | tandem |