AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fro12g02393 ATGGGGAATAAGCTGGGGAGGAGGAGGCAGATTGTTGATGAGAAGTATACAAGGCCTCAGGGGTTGTATCAGCACAAAGATGTAGATCATAAGAAGCTTCGTAAGCTTATTCTTGATTCGAAGCTTGCTCCTTGTTATCCTGGAGATGATGATTGTAGTTGTGATCTTGAAGAATGCCCTATTTGCTTCTTGTATTATCCGAGTCTGAATAGATCAAGATGTTGCACGAAAGGCATTTGTACAGAGTGTTTTTTGCAGATGAAGACACCTAATTCTACACGCCCTACACAATGTCCCTTTTGTAAAACTTTGAACTATGCTGTGGAGTATAGAGGCGTGAAAACTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAGCAAAGAGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAACGAATGCTTAAAAGGCAAGAGACGCGTCATTCAAGCAGGGTATTTGAACCAAGCGAGGCTGAATATTTCTCCACAGCAGCATCTTCTTCTGAAGGTGAGGAAATAGTTTCTGTTCCAAATGCTGCAACAAATAGACATCCTCCATGCTATAGGGAGAACAGAGACGATGAGTTTGATCTTGATCCGGAAAACATAATGCTCATGGAAGCCATCTGGTTGTCTTTTCAGGAGGATAACAAGCACAGACGCGATAATCCTAATTACGGTGATGCCACCCAATTAGCAAAATACGCAACAGAAGTTCGCCTTTTAGCCTCCATGGCCCCGCAAGCAGGGTATTCACCTTCATCCTCATCACCTTCTGGTGGACTTGCATGTGCCATAGCCGCGCTCGCTGAACGCCAGCAAACAGGAGGTGAATCGTCATCCAACTACCACAATTATAGTGGGAATCTATCAACATACAACGTGCATCCCAACCATAGCCAAACAGGGTTATTATCACTTGATAACCATCTGCAGATCGATCAGGATAATTCAGAAGAATTGGGTGAAACGACGTTTGGGTATGATGGTAATTTGAGGACAATAGACGGTAATGATGATTTAAGCAGAGGGCAGGATAGTCTACATGATGAGGTGGAAAATGGTGGTTATGGTGGTGGTGGGAATATAGTTCCGGAGAGCTTTGAAGAGCAGATGATGCTAGCCATGGCGGTTTCATTGGCGGAGGCGCGAGCTAGGAGTAGTAGTGCACCGGAGGTTGCGTGGATTTAG 1215 44.12 MGNKLGRRRQIVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQETRHSSRVFEPSEAEYFSTAASSSEGEEIVSVPNAATNRHPPCYRENRDDEFDLDPENIMLMEAIWLSFQEDNKHRRDNPNYGDATQLAKYATEVRLLASMAPQAGYSPSSSSPSGGLACAIAALAERQQTGGESSSNYHNYSGNLSTYNVHPNHSQTGLLSLDNHLQIDQDNSEELGETTFGYDGNLRTIDGNDDLSRGQDSLHDEVENGGYGGGGNIVPESFEEQMMLAMAVSLAEARARSSSAPEVAWI 404
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fro12g02393 404 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Fro12g02393 404 PANTHER PROTEIN SIP5 1 325 IPR039301 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fro12g02393 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fro Fro-Chr12:31693620 Fro2g01435 Fro-Chr2:18111515 wgd