Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fro12g02427 | ATGAGTGGGGGTAGGGTTTCCATTCCGAACAATGTGAGGAAGACGATCCAGAACATCAAGGAGATCACGGGTAATCACAGTGAAGATGAGATATATGCAATGCTTAAAGATTGCTCTATGGATCCGAATGAGACCGCTCAGAAGCTTCTCTTGCAGGATCCGTTTCATGAAGTTAAGAGGAAGCGTGACCGCAAGAAAGAGAATCAGAATAAAGAACCTACAGAGTCCAGATGGAAACCTGGGATGCAGGGAAGGGGGAATAGGGGTGGAAGGTTGAACTACTCAACTCGTCGCACATATAATGATGTAGGTGGTAGCAAGCCATTACTTTCTGCAAAGGAAAATGGAATGAGTAAAGGTGCAGATGATGGTCCAAATCAGTCAATGCCTCAAGGTCAGAAGAATAAAGAGACAATTGTGGTTAAAAGCTCTTCTCGTGCTGTACCTGATAGAATTGCACATTCTTTTGTGGGGAGTGATGAGAAGAAATCTGAAGTGGTTCCTGCTGTCGAGGCAAGTAAGGACCCCACTGTTGGCGATAGTAGTGGGCCCCTTATCTCGAGTGCCAATGAGACATCAGCTTCTAAGACACCATCACCTTCACCAGGATTATATTTGCCAGAGAAAGACCCTATTCTGATGTCTTCACAAGATTCACGGGTCCCTGTTGGTACAATCAGACATGAAGTTGGGAGTCAACAAACTCCGATTGACGAAATTCACGAGACCCCCCTTGAGACTGTATCAACTGCATCTGGTTCTGAGGTTGGAAACTCCTCCATGCAAGGGAAGCCGCCATCTTCTCATGTCTCACTTTTTGCTTCCAGGCCTTCTTCAAACTATAACAATAAACCACAACAAGCAATCGGGCCTCAAAAAGTCGGTCCAAGTATGGAATGGAAACCAAAATCAACAAATCCGATTCCTGCGCAAGAGACTGAGTCACCTGAGCCAATTAAGGTGCATGTGGTTCAAGTTGAAAGTCAAACTCCAAACCTGTTTGCAGCCCATAATCTTGATGCAAAGGACATGATCCATGGGCTGGAGAAGAAGCTAGAACAATCACACATTTCAGGTGACCAACATGTCATTATTCCAAATCACCTCCATGTTCCTGAAGCTGAAAAACTCGGGTTCTACTTTGGGAGTTTTGATGCCAGTTTCAGTTTAAACATGACCTCCTCAAACAGGCCTGGGCCTGAGCCCATGAGTGACAAGAGTTCCGAGGCTTCTGAGGTGGTTGATGAAAGTATAGACGAGCAGCCCAGAAATCAGAATAATGCTTTGGCAAGTGCTGATGATGAAGACCCTCTTGATCATCCATCATCATCTAATAACATACCTGAGAATCTATCAGCCGAAGGTGACGTGCCATCAAATTCAGGCTTTAATCACCATGAATCTGAACAAGAGACTGCAGCAAGCCATCAACACCCAATTCTTCACACGGCTCCTAACTTAAGTTTTGGCTTTATTCCACCAATGATTGGGACCCACCCCACATCTTTTGAAACCAACGAGTCTCATAGTCATGATGGTTCACAAGTCCCAAACGTTGTAGTTCAGCAACCATTTGACCCAGCAAGCTATTTTGCTCAATTTTATCGTCCTGGTGCTGACGTGGATGGTCGCATGTCACCCTTTCATTCAACCGGGGTTCCAACCAAGTTTAATGGAAATATTCCTGTCTTATCTCCACAAGCTTCTCATTCTTCTCAAGAGGTTGTGAACTCACAAATGTTATCATCCGGTGCTGGTCCAACAGCAATACCTACCACACAAACTGGCGGGTTTATGCAAACCTCCATAGCCATGACTCAGCAACCGTTACCTGTTTTCAGGCAACCAACTGGGGTTCATTTACCACATTACCCTCCAAATTATATCCCATATGGACCATATTTCCCCCCATTTTATGTTCCTCCAGCAGCTATTCATCAATATTTGAGTAATAACACATTCCCACAACCTCCTCAAGCTGGTAGTATGTACCCGCCCCCACCAGTGGCTAGCTCAAAATACCCACTTCCACAATACAAAACGGGTGGTAATACAGGGAACCCTGCTAATATTGGAATGCCCGGAAGCTATGGACTGTACGGCTTAAACGCAGCTGGCTATAACTCTGGTTCAGTGGCTACAACTGGCAATTCAACTTCCGATGAAGACCTAGGTGGCTCCCAGTTTAAGGAAAGTAATGTCTACATTACTGGACAGCAGAGTGAAGGTTCAGGTGTATGGATGGCTGCACCGGGTCGAGACATATCAGGTATGCTGCAGGCTAATTCTTTCTATAACATTCCTCAAGGCGGCCAAGTTGCATATACGCCAACACAAGCCAGCCATGGGAATTTTGCCAGTCTTTATCACCACCCGGCTCAACCAGTAACCACCAGTGCGGTTCACCCACTTCTCCAACAGTCCCATGGACCCGGCGTTGACATGGCAGGACCCACACATCAAATCAACTGGCCTAATAACTACTAA | 2487 | 45.76 | MSGGRVSIPNNVRKTIQNIKEITGNHSEDEIYAMLKDCSMDPNETAQKLLLQDPFHEVKRKRDRKKENQNKEPTESRWKPGMQGRGNRGGRLNYSTRRTYNDVGGSKPLLSAKENGMSKGADDGPNQSMPQGQKNKETIVVKSSSRAVPDRIAHSFVGSDEKKSEVVPAVEASKDPTVGDSSGPLISSANETSASKTPSPSPGLYLPEKDPILMSSQDSRVPVGTIRHEVGSQQTPIDEIHETPLETVSTASGSEVGNSSMQGKPPSSHVSLFASRPSSNYNNKPQQAIGPQKVGPSMEWKPKSTNPIPAQETESPEPIKVHVVQVESQTPNLFAAHNLDAKDMIHGLEKKLEQSHISGDQHVIIPNHLHVPEAEKLGFYFGSFDASFSLNMTSSNRPGPEPMSDKSSEASEVVDESIDEQPRNQNNALASADDEDPLDHPSSSNNIPENLSAEGDVPSNSGFNHHESEQETAASHQHPILHTAPNLSFGFIPPMIGTHPTSFETNESHSHDGSQVPNVVVQQPFDPASYFAQFYRPGADVDGRMSPFHSTGVPTKFNGNIPVLSPQASHSSQEVVNSQMLSSGAGPTAIPTTQTGGFMQTSIAMTQQPLPVFRQPTGVHLPHYPPNYIPYGPYFPPFYVPPAAIHQYLSNNTFPQPPQAGSMYPPPPVASSKYPLPQYKTGGNTGNPANIGMPGSYGLYGLNAAGYNSGSVATTGNSTSDEDLGGSQFKESNVYITGQQSEGSGVWMAAPGRDISGMLQANSFYNIPQGGQVAYTPTQASHGNFASLYHHPAQPVTTSAVHPLLQQSHGPGVDMAGPTHQINWPNNY | 828 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 180 | 200 | - | - | |
| Fro12g02427 | 828 | Pfam | GBF-interacting protein 1 N-terminal | 8 | 67 | IPR009719 | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 248 | 290 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 45 | 210 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 248 | 315 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 441 | 476 | - | - | |
| Fro12g02427 | 828 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 828 | IPR044277 | GO:0051082(PANTHER) | |
| Fro12g02427 | 828 | SUPERFAMILY | UBA-like | 8 | 70 | IPR009060 | GO:0005515(InterPro) | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 155 | 169 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 121 | 142 | - | - | |
| Fro12g02427 | 828 | MobiDBLite | consensus disorder prediction | 392 | 476 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fro12g02427 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 92743 | Fro12g02427 | Fro9g01244 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fro | Fro-Chr12:3888631 | Fro12g02427 | Fro-Chr12:32100183 | dispersed | |
| Fro | Fro-Chr11:393578 | Fro12g02427 | Fro-Chr12:32100183 | transposed | |
| Fro | Fro-Chr11:26533931 | Fro12g02427 | Fro-Chr12:32100183 | transposed | |
| Fro | Fro-Chr12:32100183 | Fro9g01244 | Fro-Chr9:25297039 | wgd |